Primulina tabacum: 142542943
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Entry
142542943 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: hyperosmolality-gated Ca2+ permeable channel 1.8-like
KO
K21989
calcium permeable stress-gated cation channel
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptab02000
]
142542943
Transporters [BR:
ptab02000
]
Other transporters
Pores ion channels [TC:
1
]
142542943
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
SpoIIE_N
TadE
Motif
Other DBs
NCBI-GeneID:
142542943
NCBI-ProteinID:
XP_075505983
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Position
4:7918163..7924455
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AA seq
798 aa
AA seq
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MATLEDIGVSALINILGAFAFLLAFALLRIQPINDRVYFPKWYILGKRTSPRTRFGVVGK
FVNLDIKTYFTFLNWMPEALRMSESEIISHAGLDSAVFLRIYTLGLKVFGPIAIAALLLL
IPVNVSGGTLFSLRRDLVVSDIDKLSISNIRPKSYKFFIHISMEYIFTFWVCYMLYNEYG
RVASMRLNFLASQGRKPEQFTVLVRNVPGASGRSISDNVETFFQKNHPDHYLCHQAVYNA
NKFGKMARMRNQLQNWLDFNQLKFERHPDKRPTRKRGFFGLWGERVDSIDFYKEQIKYLD
KKLTLERQKVLKDSNSVTPAAFVSFTSRWGAAVCAQTQQSKNPILWLTNWAPEPRDVYWK
NLAIPFFSLSIRKLVISISVFALVFSYMIPIAFVQSLANLEGLERVAPFLRPVVEWSFLK
SFMQGFVPGLVLKIFLYYLPSILMVMSKIEGHIALSVLERRTAAKYYYFMLVNVFLGSIV
AGTAFQQLHAFLHQSATQIPRNIGISIPMKATFFITYIMVDGWAGIAFEILRLKDLVIFH
LKNMFIVKTERDLDKAMDPGGLDFPEALPSLQLYFLLGIVYMVVTPILLPFILGFFAFAY
FVYRHQVINVYEQQYESAAAFWPHVHARIVASLLISQLLLLGLLSTKKAANSTPLLVVLP
ILTLTFHKYCKNRFEPAFRRHPLEEAMNKDIQDHASESDVNLKSLLADAYLHPIFQSFEE
VDLVEVKVEKNPDDIASSSPSSLSSLSPQHAHHLEDETSDNFQRYEVEPPHTTYHYEVES
PNYMYGYHFESHYHGYQY
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctggaggatattggggtgtcagcactgattaacatactgggtgcctttgca
ttcttgctggcttttgcactgcttaggattcagccaatcaatgatagagtttactttccc
aaatggtacattttagggaagaggaccagtcccaggactaggtttggtgtggtgggcaaa
tttgtgaatcttgatatcaagacttacttcacttttcttaactggatgcctgaggctctg
aggatgagtgagtctgagattattagccacgctggacttgattctgctgttttcttgagg
atctacactcttggactgaaagtatttgggcctatagccattgctgcgctcttacttctg
atacctgtgaatgtatctggtggaactctgttttctcttcgccgcgacttggttgtcagc
gacattgacaagctttcaatatcaaatattcgtcccaaatcttataagttttttatccac
atatcaatggaatacatatttacattttgggtttgttacatgctgtataatgaatatggt
cgagttgcttcaatgcgactaaactttctggcttcacaaggcaggaagcctgaacaattc
acggttcttgttaggaatgttcccggtgcttctggacgttcaatatctgataatgtcgag
actttctttcagaaaaatcatccagatcactatctatgccaccaggctgtatacaatgct
aataagtttggcaaaatggctcgaatgagaaaccaacttcaaaattggctggacttcaat
caacttaagtttgagagacatccagacaagaggccaaccagaaagagaggcttctttgga
ctttggggtgaaagggttgattctatcgacttctacaaagagcaaatcaaatatcttgac
aaaaaattaactttggagcgtcaaaaagttctgaaagactctaattctgtcacaccagca
gcatttgtgtcatttacttcaagatggggggcagctgtttgtgcacagacacaacaaagc
aaaaatcctattctgtggttaacaaattgggcccctgaaccccgggatgtgtactggaag
aatctagctataccctttttttcacttagcattcgaaagcttgtgatatcaatatctgta
tttgcattagtattctcttacatgattccaattgcttttgttcaatcgttggctaatttg
gaagggctagagagagtggctccttttctcaggcccgtagttgaatggtcgtttctcaag
tcgtttatgcagggtttcgttcctggtctagtccttaaaatctttctgtattatcttcct
tcaattttaatggtcatgtcaaaaatagaggggcacatagcattatcggttttggaacgg
agaactgccgcaaaatactactacttcatgttagtcaatgtgttcttaggcagcatagta
gctggaacagcattccagcaacttcacgctttccttcaccaatcagctacccagatccca
cgaaacattggcatctcgataccaatgaaggctactttctttatcacatacataatggtc
gatggctgggccggtattgcctttgaaatcctccgattaaaagatctagtcatttttcac
ctaaagaacatgtttatcgtaaaaaccgaaagagacttagacaaggcaatggaccctgga
ggccttgattttcctgaggctctaccaagtcttcagttatacttccttcttggcattgtg
tacatggttgtcacccctatacttcttccttttatactcggattctttgcctttgcatat
ttcgtttatcgtcatcaggtgattaatgtgtatgaacaacaatacgagagcgctgctgcg
ttttggccacacgttcatgcacgtatagtagcaagcttgcttatatcgcaactgctacta
ttaggcctattaagcacaaaaaaggcagcaaactccactcctctacttgtagtgttacct
atattgactctaactttccacaagtattgcaagaatcgatttgaacctgcattcaggagg
caccctcttgaggaagccatgaacaaagacatacaagatcatgcttctgaatctgatgtc
aacttaaaatctctcttagctgatgcatacttgcacccgattttccagtcatttgaagaa
gttgacttggttgaagtaaaagttgagaaaaacccggatgatatcgccagctcttctcca
agctcgcttagttctctgtcccctcaacatgcccatcatcttgaagatgaaacatcagac
aatttccaacgttatgaagtcgaacctcctcacaccacctatcattatgaagttgaatca
ccaaattacatgtatgggtaccactttgaatcacattatcacggatatcagtattga
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