Primulina tabacum: 142543122
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Entry
142543122 CDS
T11246
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER-like isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142543122
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142543122
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142543122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
Prok-RING_4
zf-C3HC4_3
zf-RING_5
zf_RING_Vps8
zf-RING_16
zf-RING_UBOX
zf-C3H2C3
zf-C2H2_3
Motif
Other DBs
NCBI-GeneID:
142543122
NCBI-ProteinID:
XP_075506287
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All DBs
Position
4:13756497..13760809
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AA seq
285 aa
AA seq
DB search
MYIGSIVFSEILLFSSFQPIFVGARTLTNQSQNYFSKMSWNTQMDVYYQDHSMPYNSIGS
FVDFFGGLTYDHVNYIFADVPYVQENAHPAMNSNLYKLAASEPGNLSYYEYGHGCVVNNH
ISGSNQHEGHLESPSVLAGNQATISHVHQAEISNTDSHASPLECPRNPQAARDFEVVWQD
NIDPDNMTYEELLELGETVGTQSRGLSQDQIALLPTSKFKWTFFFRKKFSGERCVICQME
YKRGDKRIILPCKHLYHTVCGSRWLRINKACPICYKDVIADVPKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcggcagtattgttttttcagaaatcttgttattttcttcatttcaaccgatt
ttcgtcggtgctagaactctgactaatcaatcgcagaactatttttcgaaaatgagctgg
aatactcagatggatgtttattaccaagatcattcgatgccttacaattcaattggaagc
tttgtggatttttttggaggtcttacttatgaccatgtcaattacatttttgctgatgtt
ccttatgtacaggagaatgctcacccagcaatgaattctaatctatacaaacttgctgca
tctgaaccggggaatttgtcatactatgaatatgggcacggctgtgtggttaataatcac
atctcagggtctaaccaacatgagggacatttggagagtccgtcagttctggctggcaat
caagctactatttcgcatgtacaccaggcagaaatttcgaataccgattcccatgctagt
cctttagagtgtcctcggaatcctcaggctgctcgtgattttgaggtcgtttggcaagac
aacattgatcctgataatatgacctatgaggagttacttgagctaggtgaaacagttgga
actcaaagtaggggtctctcccaggatcaaattgcattgcttccaacttcaaagttcaaa
tggacctttttctttagaaagaaattctcaggtgaaaggtgcgtaatttgccaaatggag
tacaaaagaggcgataagcgaatcatccttccttgcaaacatctctaccatactgtttgt
gggagcagatggcttagaattaacaaagcttgtcccatttgttacaaggacgtgattgct
gatgttccaaagcactga
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