KEGG   Primulina tabacum: 142543132
Entry
142543132         CDS       T11246                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ptab  Primulina tabacum
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142543132
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    142543132
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 DEAD ResIII zf-RING_4 zf-ANAPC11 KinB_sensor zf-P11
Other DBs
NCBI-GeneID: 142543132
NCBI-ProteinID: XP_075506300
LinkDB
Position
4:complement(14002612..14016726)
AA seq 1046 aa
MGNKATEEVISTVRSVVGPEVSHMDIIRALHMAKNEPTAAINIIFDTPISFKKPGLPKKP
EPSSCNFITEPPITGLSLNQNGSRVENHDYELKSNGCSGGGGGRDESESDGDSDCGPGEA
MGSDWWFVGSGEMAGLSTCKGRTLKPSDEVSFLFPVEKKLPTPSPGKVGGGRGRQVGSCS
EIVRFSTKDGEIGRIPNEWARCLLPLVRDKKVSLAGRCISAPPVLGIMDTIVLAIRVYIN
SSMFWKGHLTPHKVAGNSAEELIVHPIPTLFRLLGLVSFKKAEFTPENLYTRKRPLNSED
SSGLHSSLLHINKFKTTFSMDGNKVENEESISDNDIDHIIGVTDSSELEEMEPPSTLLCE
LRPYQKQALNWMIHLERGHCKDDAAVTLHPCWDAYRLADKREMVIYLNAFSGDAATEFPS
TLQMARGGILADSMGLGKTIMTLSLLLTHSERGGSFSSSSFSQTFKTFKDHREESYNSEK
SPTPPKTTSKFTSFVKLMKQKALLTGGGNLIVCPMTLIGQWKTEIETHAQPGVLSLYVHY
GQTRLKDAKVMAQSDVVLTTYGVLASEFSAENTEDNGVLFSVQWFRVVLDEAHTIKSSKS
LISMAAAALAADYRWCLTGTPIQNNLEDVYSLLRFLKIEPWGSWAWWNKLVQKPFDEGDE
RGLKLVQSILKPIMLRRTKSSTDREGRTILILPPADIQVIYCNLSETEEDFYGALFKKSK
VKFDKFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAGRFLKAGQ
EGVDGNAKDAPSRAYIQEVVEDLRKKEQGECPICLEAFEDAVLTPCAHQLCRECLLASWR
SSTSGLCPVCRKTISKQELITVPTDSRFRVDVEKNWVESSKISALMHELKNPRSMGSKSI
VFSQWTAFLDLLQIPLSRGSIPFLRLDGTLNQQQREKVIKQFSEDNNIMVLLMSLKAGGV
GINLTAASHAYVMDPWWNPAVEEQAVMRIHRIGQTKRVRIRRFIVKGTVEERMEAVQARK
QRMISGALTDQEVRTARLEELKMLFT
NT seq 3141 nt   +upstreamnt  +downstreamnt
atggggaacaaagctactgaagaagtaatttctacggttcggtcggttgtgggacctgaa
gtctcccacatggacataattcgagctcttcacatggcgaaaaacgaaccaactgctgct
ataaacatcattttcgacactccgataagcttcaagaaaccgggattgcccaaaaaaccg
gagccctccagctgtaatttcattacagagcctccgatcactggcttgagcttaaaccag
aacggtagtcgtgttgaaaatcatgattatgaattgaaatcaaacggttgttcaggcggt
ggtggcggaagagatgaaagtgagagtgatggggacagtgactgtgggcctggggaagca
atgggtagtgactggtggtttgttgggagtggtgagatggcagggctttcaacttgtaaa
gggaggactttgaaacccagtgacgaggttagtttcttgttcccagttgagaaaaagttg
ccaaccccctcgccaggtaaggttgggggtggacgaggtcggcaggtgggttcttgctct
gagattgtgagattttctaccaaagatggagagattggccgcattccaaatgaatgggct
cgctgtcttttgccacttgtgagggataagaaagtttctctggctggtcgctgcatatct
gctcctcctgtgttggggattatggacactatcgttttggctattcgtgtttatatcaac
agttcaatgttctggaaaggccacctgactccacataaagtagctggtaattcagcagag
gagttaattgttcaccccatcccaaccttgttcagattattgggacttgtgtcctttaag
aaggctgaatttactccagaaaatctgtacacaaggaagaggcccttgaattctgaggac
agctctggtttacattcgtcacttttacatatcaataagttcaagaccacattttccatg
gatgggaataaagttgaaaatgaagagtcaatttctgataatgacattgaccatataatt
ggtgttacagatagctcagagttagaggaaatggaacctcctagcacactgctgtgcgaa
cttcgcccttaccaaaagcaggctctcaattggatgattcacctcgagaggggacactgc
aaggacgatgctgcagtgactctgcatccatgttgggatgcttatcgccttgccgataag
agggagatggtgatatacctgaatgcattttctggtgatgcggccacggaattccctagc
acacttcaaatggcaagagggggaattttagctgattctatggggcttgggaagactatc
atgactttatctcttcttctaacgcattctgaaagagggggatcatttagtagctcatct
tttagccagacattcaaaacattcaaagatcaccgtgaagaaagctataattctgaaaaa
tctccaacacctccaaagacaacatcaaagtttacttcttttgttaagcttatgaaacaa
aaagcattgctcactggcggtggcaatctgattgtatgccctatgacactgatcgggcag
tggaagactgaaattgaaactcatgctcaacctggggtgctgtctctttatgttcactat
ggacaaactagattaaaggatgccaaagtaatggctcaaagtgatgttgtactaactacc
tacggagtgttggcttcagaattttcagcagagaacacggaggacaatggtgtgttgttt
tcagtccaatggttcagagtggttcttgatgaggcacataccataaaatcttctaaaagc
ctaatttctatggctgcagctgctcttgctgccgattatcgatggtgccttactggtaca
cctatccagaacaacctggaggatgtttacagtctgcttcgatttttgaagattgaacct
tggggaagctgggcatggtggaacaaattagtacaaaaaccttttgatgagggagatgag
aggggattaaagttggttcagtctatcttaaagccaataatgctacgaagaactaagtca
agcacagaccgagagggcaggaccattttaattcttccacctgcagatattcaagtgata
tattgtaatctgtcggaaacagaggaggacttctacggggctttgtttaaaaaatcgaag
gtgaagtttgataaatttgttgagcaaggccgggttcttcataactatgcttcgattttg
gaacttcttttgcgacttcgtcaatgctgtgatcacccatttcttgttatgagtcgaggt
gacactcaagagttctctgatttgaacaagctagcgggacgtttcctgaaagctggtcag
gaaggtgtggatggcaatgccaaagacgcaccatcccgtgcatatattcaggaggttgtt
gaagacttgcggaaaaaggaacaaggagaatgcccaatatgcctggaagcttttgaagat
gcagtattgacaccttgtgctcatcaattatgccgagaatgtctattggctagttggaga
agctctacatctggtctttgtccagtttgtaggaagactatcagcaaacaggaactcatc
acagtgccaactgatagtcgcttccgagttgatgttgagaaaaactgggtagaatcatca
aaaatatctgcgctaatgcatgaactaaaaaatccaaggtccatgggctccaaaagcatt
gtttttagtcaatggacagcctttttggatcttttacagattcctctttctaggggtagc
attccatttcttcggctggatgggaccctaaaccagcaacagcgcgaaaaagtaatcaaa
caattctctgaagacaataatataatggttttacttatgtcgttgaaggctggtggagtt
ggaataaatctcactgcggcatctcatgcttatgtaatggatccgtggtggaatccagca
gtagaggaacaagcagtcatgcgaattcatcgtattggccaaacgaaaagagtgagaatc
aggaggtttattgtgaagggcacagtcgaggaaagaatggaggcagtacaagctcggaag
caacgaatgatatctggtgctctaactgatcaagaagttcgaactgcacgtttagaagaa
cttaaaatgctcttcacttag

DBGET integrated database retrieval system