Primulina tabacum: 142543178
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Entry
142543178 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142543178
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142543178
Enzymes [BR:
ptab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
142543178
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
142543178
Ribosome biogenesis [BR:
ptab03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
142543178
23S rRNA modification factors
142543178
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
zf_C2H2_13
Methyltransf_25
Methyltransf_11
Methyltransf_24
Motif
Other DBs
NCBI-GeneID:
142543178
NCBI-ProteinID:
XP_075506386
LinkDB
All DBs
Position
4:complement(19780776..19784403)
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AA seq
332 aa
AA seq
DB search
MAVKQFLQLPVSRICTLSNKIVFTLFSIKFIPHSPQLWARWVRACVLQPDRSFTALSLVK
TEVKKKKRRLDEICLERFEQYSRTFIQSWITQGKVTVDGRVVNKCGTPISVRSIVEIKAE
VPKYVCRAGHKLEAAIEQLEIDVTGKVILDSGLSTGGFTDCLLQYGASFVYGVDVGYGQV
ADKIRRDGRVSVIERTNLRYLTELPQKVDLVTLDLSFISSLTVMPAVISLMKDGGTMVSL
IKPQFEAHRSQVGGGGIVRDPLVHQEVLAKIINGVQKLGFECRGWIESPLKGADGNKEFL
ACFDRKPMKYDALVSLGEADIYKLYRPMRQET
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaagcagtttctgcaacttcccgtatcacgaatttgtacattgagtaacaaa
attgtattcaccctcttctctatcaaattcattccacactctccacagctttgggcgaga
tgggtcagggcctgcgtgctacagcctgacagaagttttactgcattaagtttggtgaaa
actgaagtgaagaaaaagaaaaggagactggacgagatatgtcttgaaagatttgagcag
tatagtcgaacgttcattcagtcttggatcactcaaggcaaggtaaccgttgatggtaga
gtggttaacaaatgtgggactcccatctctgttagatctatcgtggagatcaaggctgaa
gttcctaaatatgtgtgtagagctgggcacaagttggaggctgccattgaacaactagag
atcgatgttactggaaaagttattcttgattcaggactttctactggagggtttaccgat
tgcttgcttcaatatggtgcttcatttgtttatggtgttgatgtgggttatggacaggtg
gctgacaaaatacgaagagatggacgtgtgagtgttatagaacggaccaatttgcgatat
cttactgaactgccgcagaaggttgatttggttactttggacctttccttcatttcttca
ctgacggtcatgcctgctgttatcagcttaatgaaagatggcggaacgatggtttcacta
ataaaacctcaatttgaggcacaccgatcacaagtgggaggtggtgggattgtgagagat
cccttagtccatcaagaggttcttgcaaagatcataaatggtgtacaaaagctgggattc
gaatgcagaggatggatagagtctcccttaaagggtgctgacggaaacaaagagtttctt
gcttgcttcgatcgaaaacctatgaaatatgatgcacttgtatcgcttggtgaggcagat
atttacaaattgtaccgacccatgagacaagaaacgtga
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