Primulina tabacum: 142543456
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Entry
142543456 CDS
T11246
Name
(RefSeq) AP-1 complex subunit gamma-2-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
ptab Primulina tabacum
Pathway
ptab04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
142543456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142543456
Membrane trafficking [BR:
ptab04131
]
Endosome - Golgi transport
Others
AP-1 complex
142543456
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_2
PDS5
HEAT_GCN1
U83
SUV2_M
Cnd3
Motif
Other DBs
NCBI-GeneID:
142543456
NCBI-ProteinID:
XP_075506850
LinkDB
All DBs
Position
4:45981929..45997250
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AA seq
883 aa
AA seq
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MDSIMNPFSSSTRLRDLIRAVRACKTAAEERAAIRKECASIRAAISENDQDYRHRNLAKL
MFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSIKQDLNH
TNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCTIRIIKKVPDLAE
NFINPAVALLKEKHHGVLLTGVQLCMDMCKVSTEALEHFRKNCIGILVKVLKDLANSSYA
PEYEISGISDPFLHIRLLKLLRELGQGDPDASDNMNDILAQVATKTESNKNTGNAILYEC
VATIMSLEDNSGLRVLAVNILGRFLSSRDNNIRYVALNMLMKAIILDSQAVQRHRATILE
CVKDSDASIRKRALELVYLLINESNVKSLTKELVDYLEVCDPEFKGELSTKICSIVEKFS
PEKIWYIDQMLKVLSEAGNYVKDEVWHALIVVITNASNLHGYTVRSLYKTVQTACEQETL
ARVAVWCIGEYGELLVSNVGMLGVEDPVTVTEVDAVDVVETVIQRHSADLTTRAMCLIAL
LKLSSRFPSCSKRINDIVIHQKGSLVLELQQRAIEFNSIIEKHGRIRSALVERMPVLDEA
TYSGRRAGSVPPAFSTSQGVPSKIPKGVAKPTSAPLVDLLDLSSDEIPGPSSSDGAFLQD
LLGVDLSSSSQGTNRTPNNGTDVLLDLLSIGTPPSQSQSDSSPFDILQSGKDNKTSVTVL
DNLASNSAPSAKTFSPAGSSSMMDLLDGFGPSSSAPVAETNGPSYPSIVAFESSSLKLTF
NFSKEPGNLQSTLIEAEFMNKSPDIYSNFVFQTAVPKFLQLHLDPASSSSLPASGNGSIT
QKLRVSNSQHGKKPLVMRIRINYKVNGKDVLEEGQINNFPHEL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggactcgatcatgaatccgttctcctcctccactcgcttgagggacttgattcgggct
gtacgtgcttgcaaaactgcagcagaggagcgggctgctataagaaaagaatgtgcttca
attcgagctgcaattagtgaaaatgaccaagattatagacatcgcaatctggcaaagctc
atgtttattcacatgcttggttacccaacacattttggtcaaatggaatgcctgaagtta
attgcatctcccggatttccagaaaaaagaataggatatcttggtcttatgttgcttctt
gatgaaagacaggaagttctgatgcttgttaccaattcaattaaacaagatcttaatcac
accaaccagtatattgttggacttgctctttgtgccttgggaaatatctgttctgctgaa
atggctcgtgatcttgctccagaagttgaaagattacttcaatttagggatcctaatatc
aggaagaaagcagcattatgcacaataaggatcataaagaaagttccggacctggctgag
aattttataaatcctgctgttgcattgctaaaagaaaaacaccatggagtgttattaact
ggagttcagctttgtatggatatgtgtaaagtcagtacagaagctctcgagcatttcaga
aagaattgcataggcatcttagtcaaagttctaaaggatcttgcaaacagttcatatgca
cctgagtacgagatttctgggatttcagacccttttcttcatattagattgctcaagctc
ttacgagagttgggacaaggagatcccgatgctagtgataatatgaatgatattcttgcc
caggtggcaaccaagactgaatcgaacaaaaatacgggaaatgcgattctttatgaatgt
gttgctaccatcatgagccttgaagataatagtgggttacgtgtgcttgctgtcaatatt
ttgggaagatttttgtctagccgagacaataatattagatatgttgcattgaacatgttg
atgaaagctattattttagatagccaggcagtacagaggcatcgagcaacaatattggaa
tgcgtaaaggattcagatgcttcaatccgtaaaagggcccttgaacttgtttatcttctg
ataaatgaaagtaacgtgaagtctttgactaaggagctcgttgactatctagaagtatgt
gatccagaatttaagggagagctctccaccaaaatttgctccattgttgagaagttttcc
cctgagaaaatatggtacattgatcagatgcttaaggttctgtctgaggctggaaactat
gtgaaagatgaagtgtggcatgcccttattgtcgtaattaccaatgcttctaatctccat
ggatatactgttagatcactgtacaagactgtacaaacagcatgtgaacaggaaactctg
gctcgagttgccgtttggtgcatcggagaatatggggaattgttggtcagtaatgttgga
atgcttggtgtagaggatccagtaacagtaacagaggtagatgcagtagatgttgtagaa
actgtaattcagcgccattctgcagatctcacaactcgggctatgtgtttgattgctttg
ctaaagctatctagtcgatttccctcctgttcaaagagaataaatgatatcgttatccat
cagaaaggaagccttgtgcttgaactgcaacagagagccattgaattcaattctatcatt
gagaagcacgggagaatcaggtctgcactagttgaaaggatgccagtacttgatgaggct
acttacagcggtaggagggctggatctgtgcctcctgccttttcaacttctcaaggagtt
ccatcaaaaattccaaagggagttgccaagcccacttcagctccgcttgtagatttactc
gatcttagttcagatgaaatccctggacccagctcttctgatggagcttttcttcaggat
cttcttggggttgatctatcctcatcttctcaaggaactaaccgaaccccaaataacggc
actgatgttttgctggaccttttgtctatcggaactcctccatctcaatctcaaagtgac
tcatccccgtttgatatattgcaatccggaaaagataataaaacttccgtgactgtgttg
gataatctagcatcaaattctgcaccttcagcaaaaactttttctccagctggaagttct
tcaatgatggatttgttggacggttttgggcctagctcatcagcgcctgttgcagaaaca
aatggcccttcctatccatcaattgttgcattcgaaagcagctccttgaaattaactttc
aacttctcaaaagaacctggaaacttacagtccacattaattgaggctgaattcatgaac
aagtcacccgatatttattcaaattttgtattccagactgctgtcccgaagtttcttcaa
ctgcacctggatcctgccagcagtagttcacttcctgcaagtggtaatggatcaatcaca
cagaaattacgagtttcaaacagccagcatggcaagaaaccactagttatgcgcataagg
ataaattataaggtcaatggcaaagatgttttagaggaagggcagataaacaatttcccc
cacgagttgtga
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