Primulina tabacum: 142543484
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Entry
142543484 CDS
T11246
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142543484
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142543484
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
KH_GLD-3_3rd
Motif
Other DBs
NCBI-GeneID:
142543484
NCBI-ProteinID:
XP_075506893
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All DBs
Position
4:46464688..46466605
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AA seq
439 aa
AA seq
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MALTYIKLSILVAFGFLLVIEMIPRSSAKIANYDEYLQKRAEESFEASLKAFNPKPEEVT
DDFNQLVGEELASENVTRRNLRERGCRATNAIDQCWRCDRNWANNRKKLADCARGFGHHT
TGGKMGRIYVVTNPSDDNVDNPKPGTIRHAVIQPEPLWIIFSHHMIIRLRQELIFTSHKT
IDGRGAEVHIAFGAGLTLQFVQNVIIHNVWIHDIIPASGGLIRDAINHLGFRTRSDGDAI
SVYSSSNIWIDHVSLSKATDGLIDVIEASTAITISNCKFNHHNDVMLLGAHDSDAKDAIM
QVTVAFNRFGVGLIQRMPRCRWGFFHVVNNDYSHWELYAIGGSAHPTILSQGNRFRASNG
RYIKEVTKRDYAPKSEWMKWQWRSEGDLFMNGAFFTESGPPMTRNPLTARNTIRFKPGSF
VGRLTRYAGALRCIRGRPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaacttatattaaattatcgatccttgtggcgttcggattcttgttagttatc
gaaatgataccaagatccagcgctaaaatcgcaaactacgacgagtatttgcagaagaga
gctgaggaatcctttgaggcatctttgaaagcatttaatcctaaacctgaggaggtgaca
gatgattttaaccaactagttggcgaggagttggcaagcgaaaatgttacaaggcggaac
ctccgagaacgtggctgccgggccacgaacgccatcgaccagtgttggcgttgcgaccga
aactgggccaacaaccggaagaagctagccgactgtgccagaggcttcggacaccacacc
acaggaggcaaaatggggcgaatctacgtcgtaaccaatccatctgatgacaacgtggac
aacccaaagcctggaaccatccgccacgctgtgatccaaccggagccgctatggatcatc
ttctctcatcacatgatcatcaggttaaggcaagagctaatttttaccagccacaagacc
atagatgggagaggagcagaagtgcacattgcttttggtgcaggcttaacactccaattt
gtccaaaatgtgatcattcacaatgtgtggatccacgacataattccggcctcaggtggg
ctgatccgggacgcgattaaccaccttggtttccgaactaggagcgatggagatgccata
tcggtttatagttcaagcaatatatggatagatcatgtttctttatctaaagctacagat
ggacttattgatgtgatcgaggcttccactgctataaccatctccaactgcaaattcaac
caccataatgatgtgatgctcttgggtgcacatgatagcgatgctaaagatgcaatcatg
caagtcacggtggctttcaaccggttcggagtgggtttgatccagagaatgccacggtgc
cgatggggtttcttccatgtcgtcaacaacgattactcccactgggaactgtacgccatc
ggcggtagcgcacatcccaccattcttagccaaggaaaccgattcagagcctcaaacggt
cgatatatcaaagaggtaaccaagagggactatgctccgaagagcgaatggatgaaatgg
caatggcggtccgagggcgatctgttcatgaacggagccttcttcacagaatcagggcct
ccaatgacaagaaatccgttgacagcgagaaataccatcaggttcaagcctggttcattt
gtagggaggctgactcgttacgccggtgccctcaggtgcatcagaggcaggccatgttaa
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