Primulina tabacum: 142543515
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Entry
142543515 CDS
T11246
Name
(RefSeq) protein argonaute 7-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142543515
03036 Chromosome and associated proteins [BR:
ptab03036
]
142543515
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
142543515
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
142543515
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
142543515
microRNA pathway
RISC loading complex
142543515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
142543515
NCBI-ProteinID:
XP_075506939
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All DBs
Position
4:46955675..46959415
Genome browser
AA seq
1008 aa
AA seq
DB search
MEDEESNSTTKSFSGNRSAHAYHYHHQLLQSSNRLAYGYGFGFGFGYQNMYQTYPALLPL
PPAIPLHLTITPPFLQNHIFESKTHFRKSPLEENNPRIATSSDSHVREFSVSQAEIEIQK
KICLPFEKRNGRKIADAKPKALAVARRPDSGGVEGRVVSLLANHFLVQFDPAQEIFHYDV
EISPNPSKEISRMIKRKLVEENSARLSGALPVYDGGRTIYSPVEFQDDRLEFYVSLPIAD
GKPVLMCVESMNPQENTRHKIFRVSMKLVSKVDGESLSSYLSKGDDITPLPQEYIHALDV
ALRESPTEKCIAAGRSFYTSLIVGEKEIGGGAVALGGFFQSLRPTQQGLALNVDFSVTAF
HESIGVIPYLQKRFDFMHDVFQNKAKSLTNEERKEVEKTMKNIRVFVRHRETVQRYRVYS
LTEEVTENLSFLDRDGTKLRVVSYFKDHYDYDVQYRNLPCLQISRRKACYLPMELCVICE
GQKFFGKLSDDQTVKVLKMGCQKPRERKKIIAGVMEGSFGPTSGDHEKEFKLKVSKEMTR
LTGRILQPPKLRLGNGGHVRNLTPSRHDRQWNLLDSHVFEGTRVERWAIVSFGGTSDQKS
CIPKFINQLSKRCENLGILLHKNTVVSPIFESMHVLGNARLLESKLRKIHKAAFNNLQLL
ICVMERKHKGYADLKRIAETSIGVVSQCCLYSNIGKLSSQFLANLALKINAKVGGCTVAL
YNTLPSQIPRLFRQDNPVIFMGADVTHPHPLDDFSPSVAAVVGSVNWPSANKYVSRMRSQ
THRQEIIQDLSTMVGEILDDFYEELSKLPQRIIFFRDGVSETQFEKVLHEELEAIRNACS
RFPSYNPPITFAVVQKRHHTRLFPCDQTDPPFTENHFSDENIHPGTVVDTVITHPKAFDF
YLCSHWGVKGTSRPIHYHILWDENEFTSDEMQKLVYNLCYTFVRCTKPISLVPPAYYAHL
AAYRGRLYLEHSDSNASTPTSTVSRTSPAKTTPLPKLAENIRKLMFYC
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagagtcaaatagcaccactaagagtttttcaggaaatcgaagtgctcat
gcctaccattatcatcaccaattgttgcagagttctaacaggcttgcttatggttatggc
tttggctttggttttggttatcagaatatgtaccaaacttacccggctttgcttcctcta
cctccggctatacctcttcatcttacaataacacctccttttcttcaaaaccacatcttt
gaatcaaaaacccactttcggaaatccccgttggaggaaaataatcctcgtatcgccact
tcttctgattcccatgttcgagagttctcggtttctcaagctgaaattgagatccagaag
aaaatttgtctgccctttgaaaagagaaatggaagaaagattgcggacgctaagccaaaa
gcattggctgttgcaagaaggccggattccggcggggtggaagggagggttgttagcctc
cttgctaatcatttcttagtccaattcgatccagcgcaagaaatttttcattacgatgtt
gaaatatctccgaatccctctaaggaaatttcgagaatgatcaagcgaaaactcgttgag
gagaattcagcgagactatctggtgctcttccggtctatgatggtggaaggactatctat
agccctgtagaattccaagatgacaggcttgagttttatgttagcctccctatagctgat
ggtaaaccggttttaatgtgtgtagaatcgatgaatccgcaagaaaatacaagacataag
atttttcgagttagtatgaagctcgtctcaaaggttgatggtgaatccttaagtagctat
ttgagtaaaggagatgatatcactccccttccccaagagtatatccatgcattggatgtc
gcattgcgggagagtccaacagaaaagtgtatagcggcagggaggtcattttacacgagt
ttgatcgttggggaaaaagaaatagggggtggagccgttgcacttgggggattcttccag
agtttaaggccaacacaacaaggccttgctctaaatgttgatttctcggtgacagctttt
catgaaagtatcggtgtgatcccttatttgcaaaagcgcttcgattttatgcatgatgtc
tttcaaaacaaggccaaaagtttgacgaacgaagagaggaaagaagtggagaaaacaatg
aagaacatcagagtctttgttcgccatagagaaaccgttcaaagataccgagtttatagc
ttaaccgaagaagttactgaaaatctatcatttcttgatagagatgggacgaaactacgg
gttgttagctatttcaaggatcactatgattatgatgtgcagtatcgaaatttgccttgc
ttgcagattagtaggaggaaagcatgttatcttcccatggagctttgtgtgatttgtgaa
gggcagaagttttttggtaaactctctgatgatcagaccgtgaaagtgcttaaaatgggc
tgtcaaaaacctcgagaacgcaagaaaatcatcgccggtgttatggaaggatcattcggc
ccaactagcggcgatcatgaaaaagaatttaaactcaaagtttcgaaagaaatgacacga
ttgaccggtagaattcttcaacctcccaaacttaggcttggcaacggtggtcatgtaaga
aacctgactccttcacgtcatgatcgacagtggaatcttttggatagccatgtctttgag
ggtactcgagttgagcggtgggcgattgtaagttttggtggcacctcagatcaaaagtct
tgcattccaaaattcataaaccagctgtctaaaagatgcgaaaatttgggcattttgctc
cacaaaaacacagttgtgagtccaatcttcgagtcaatgcacgtccttggaaatgcgagg
cttttggaatctaaactcaggaaaattcataaagctgccttcaacaatcttcaactgctt
atctgtgttatggagaggaaacacaaaggatacgctgatttgaagcgaattgctgaaacg
agtataggagttgttagccagtgctgtttatactcgaatattggcaagctaagttcacag
tttcttgccaacttggctctcaagataaatgccaaagttgggggatgcactgttgcactt
tacaacacattaccttctcaaatcccaaggctcttcaggcaagacaatccggtgatcttt
atgggcgctgatgtgacacatccccatccattagacgattttagtccctcagttgctgct
gttgttggaagcgtcaattggccttcggcaaacaagtatgtttcaagaatgaggtcccaa
acacatcggcaagagattattcaagaccttagcacaatggtaggagaaatattagatgat
ttttacgaagaactctcaaaacttccacaaagaatcatcttttttcgagatggggttagt
gaaacacaattcgaaaaagttttgcatgaagaattagaagccattcgaaatgcttgttca
agattcccaagttataaccctccgatcactttcgcagtagtgcagaaacggcaccatact
cggctattcccttgcgatcaaaccgatccacctttcacagagaatcacttctcggatgaa
aatatacatcctggaaccgtggtggatacagtgataactcatccaaaagcattcgacttc
tacctctgtagccactggggtgtaaagggtacgagtcggcccattcattaccacattttg
tgggatgaaaatgagttcacatccgatgagatgcagaagctggtttacaatctttgctac
acgtttgtgaggtgcaccaagcctatttctttggtccctcctgcatattatgctcatctt
gctgcctacagaggccggttatatcttgagcactcggattcaaatgcctcaaccccaaca
tccactgtttctaggacatcgcccgctaagacaacacctttgcccaaacttgctgagaat
attaggaagctaatgttttactgctga
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