Primulina tabacum: 142543642
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Entry
142543642 CDS
T11246
Name
(RefSeq) putative pectate lyase 10
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142543642
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142543642
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142543642
NCBI-ProteinID:
XP_075507134
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Position
4:48577330..48579399
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AA seq
400 aa
AA seq
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MEAFSRNLLFFSCVIVVLFVTTTAVRHNPHAKAPAVHVTSQNATETCGTGNPIDDCWRCD
PNWMRHRRRLADCAIGFGRNAIGGRDGRYYVVSDPSDDDPVNPRPGTLRHAVIQDQPLWI
VFKRDMVITLKQELVMNSFKTIDGRGADVHIANGACVTIQYVTNIIIHGLHIHDCKRTGN
AMVRSSPSHYGWRTMADGDGISIFAGSHVWIDHNWLSSCSDGLIDAIMGSTAITISNNYF
TQHNEVMLLGHNDSYTGDRVMQVTVAYNHFGEGLIQRMPRCRHGHFHVVNNDYTSWEMYA
IGGSANPTINSQGNRFLASSNPFAKEITKRVVNPSDDKWRHWNWKSEGDMMLNGAYFVPS
GRSAPASYTRASSLVAKPASMVGILTADAGVLYCHKGVRC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgttttcgagaaatttattgtttttttcgtgtgttattgttgtgctctttgtt
accaccaccgcggtaagacataatccacatgccaaggctcccgccgtccatgtaaccagc
cagaacgccactgagacctgcggaacgggcaacccaatagacgactgctggcggtgtgac
ccaaactggatgcgccaccgccggcgcctggcagactgcgccatcggcttcggccgcaat
gccatcggcggaagagacggcagatattacgtagtcagcgaccccagtgacgacgatccc
gtgaacccccgtccaggaaccctccgccacgctgttatccaggaccaaccgctatggatc
gtgttcaaacgcgacatggtgattaccctaaagcaagagctggtcatgaacagcttcaag
accatcgacggccgcggcgcggacgtgcacatcgcgaatggagcttgcgttacgattcag
tatgtgacaaacatcatcatccatggactgcatattcacgactgcaagcgcacggggaat
gctatggttcggagctcgccttcgcattatgggtggagaacgatggctgatggtgatggg
atttcgatatttgcaggaagccatgtttggattgatcataactggctctcgagctgttct
gatggtttgattgatgctatcatgggttccactgcgattacgatttcgaacaattatttc
actcagcataatgaggtcatgttactgggacacaacgattcttacacaggagacagggtc
atgcaagttaccgttgcctataatcattttggggagggactaatccagagaatgccgagg
tgcaggcatggacatttccatgtagtaaacaatgactacacatcttgggagatgtatgcc
ataggtggcagcgctaatcccacaatcaacagtcaaggcaacagattcctcgcctcaagc
aacccttttgctaaagagattacaaagagagtggtgaatcctagtgacgataaatggaga
cactggaactggaaatcggagggcgatatgatgctaaatggcgcctatttcgtgccatca
gggcgtagtgcacctgcgagctacaccagagcctcgagtctggtggctaaaccggcttca
atggtagggatcctcactgctgatgctggtgtgctttattgtcataaaggtgtccggtgt
tga
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