Primulina tabacum: 142544620
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Entry
142544620 CDS
T11246
Name
(RefSeq) RHOMBOID-like protein 1 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptab01002
]
142544620
Enzymes [BR:
ptab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
142544620
Peptidases and inhibitors [BR:
ptab01002
]
Serine peptidases
Family S54: Rhomboid family
142544620
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF6199
Motif
Other DBs
NCBI-GeneID:
142544620
NCBI-ProteinID:
XP_075507766
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Position
5:4787239..4790429
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AA seq
389 aa
AA seq
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MAMMTPQDIQIRVHSRRGSNMIHPVSLESPQAQPAATPNPNVVIFREVKHFKKWFPWLIP
SFVIANTVMFVITMYVNNCPKNSISCAARFLGRFSFQPFSENPLLGPSSSALEKMGALDV
GKVVHKHEGWRLMTCIWLHGGIFHLLANMLGLLVIGVGLEQEFGFVRIGLIYLISGVGGS
LLSALFIQTNISVGASGALFGLLGGMLSELITNWSIYVNKVAAFLTLVLIIAINLAVGIL
PHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVTQRYASPGYSSTPSSRKFKAYQCILWLVS
LILLIFGITVGMVTLLRGVNLNDRCSWCHYLSCVPTSRWSCNTQPVSCQAEQTGSRYTLT
CSNSSKSRTYSLLNPTATQIQGLCAQLCR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgatgactccgcaagatatccaaatacgagtccactcacggcggggaagcaac
atgatccaccctgtctcgctggagtcaccacaggcacagcccgccgcaaccccgaacccg
aacgttgttatttttcgagaagtaaagcattttaagaaatggtttccctggttgatacct
tcctttgtgatagcaaacaccgtgatgtttgttatcaccatgtatgtgaataattgcccc
aagaattcgatttcttgcgctgccaggtttctgggaaggttttcttttcagccatttagt
gaaaatcctcttcttgggccatcttcttcagcgttagagaagatgggagccttagacgtt
ggtaaagtcgtccacaaacatgaaggttggcggcttatgacttgtatctggttacatggt
ggaatttttcacttacttgccaacatgcttggtcttttagttatcggtgtcgggctcgaa
caggaatttggatttgtgcgtattggcttgatttatcttatatctggagttggtggtagc
ttgctatctgctctctttattcagacaaacatatctgttggggcttctggtgcacttttt
ggattattgggaggaatgctttccgagcttatcactaactggtctatatatgtaaacaag
gtagcggctttcttgaccctagtgctaattatcgcaatcaatctggccgtagggattctt
ccacatgttgacaatttcgctcatattggagggtttttatcaggattccttcttggtttt
gtgttcttgatccgtccccagtttgggtgggtaactcagagatatgcttctcctggatat
tcctcaacaccaagtagtcgtaaatttaaggcctatcaatgcatactttggttggtctct
ttgatccttctgatctttgggatcacggttggcatggtcacactgcttcgtggagttaat
ttgaatgatcgttgttcgtggtgccattatctaagttgtgttcctacttcgagatggagc
tgcaacacgcagcctgtttcgtgccaggctgagcaaaccggaagccgatatacattgacg
tgttcgaacagcagcaaaagcagaacatattcactgttgaatccgacagcaacccagatc
caggggttatgtgcgcagctctgtagatga
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