Primulina tabacum: 142544840
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Entry
142544840 CDS
T11246
Name
(RefSeq) polygalacturonase-2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Module
ptab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142544840
Enzymes [BR:
ptab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142544840
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
142544840
NCBI-ProteinID:
XP_075507990
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Position
5:14401538..14404168
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AA seq
426 aa
AA seq
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MEKIMMPRILFVLLLTLILLCSSPCHGRKSHKHRKVSKDRRHHLVSQQVLINVDDFGAKA
DGKSDNAQAFSRAWDKACNSTSSSTIVVPRGKTYYIKHVDFSGPCKNSVSMEIQGTVKAM
SEMYDTPKRLWIKFEDVTDMNISGGGIIDGNGEIWWKNSCKIKKTKPCQTQSAPTAMTFK
NCVNLKMTNLKLQNAQQMHVVFQDCRDVEASNLRITAPGDSPNTDGIHITKTQNINILDS
IIKTGDDCISIVNGTSNVQVQNIMCGPGHGISIGSLGENNMENHVSNILVKSVKITGATN
GVRIKTWQGGSGSARNIAFEDILMQNVSNPIIINQNYCDKNKNCVKQNSAVQVENIMYRN
IRGTSATKVAVNFNCSESFPCRNLYMENVKLNTHGEDGKAEAFCSQLTMLNAGVNSFPRC
SSAHND
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaataatgatgcccaggattttatttgtattacttttgacattaattctattg
tgttcatccccttgtcatggaagaaaatctcataagcatcgaaaagtctccaaagatcgc
agacatcatcttgtatcacaacaggtgttgatcaatgtcgacgatttcggagccaaagct
gatgggaaatcagacaatgcccaggcattcagcagagcttgggacaaggcttgtaattct
acgagttcatcgacaattgtggttccaagaggcaaaacttattacattaaacatgttgat
ttttcaggcccttgtaagaactctgtttctatggagatccaaggtacagtaaaggctatg
tcggaaatgtacgacacccctaagagactttggataaagttcgaagatgttacggatatg
aatatttcaggtggtggtattatagatggcaatggtgaaatatggtggaaaaattcttgc
aaaataaagaaaactaagccttgccaaacgcagagtgcaccaacggctatgacattcaaa
aactgtgtgaatttaaagatgacgaatttgaagctacaaaatgcacaacagatgcatgtg
gttttccaggattgtcgcgacgttgaggcttcgaaccttagaattacagcaccaggagat
agccctaacactgatggaattcatatcaccaaaacgcaaaatatcaatattctagactct
ataattaaaactggtgatgattgtatttcaatagtgaatggaactagcaacgttcaagtg
cagaacataatgtgtggaccaggccatggaatcagcattggaagcttaggtgaaaataat
atggaaaaccatgtttcaaatattttggtcaagagtgtcaagattactggagcaactaat
ggagtcagaataaaaacttggcagggagggagtggaagcgcaagaaacatcgcgtttgaa
gatatcctgatgcaaaatgtctccaatcccataatcataaatcaaaattactgtgacaaa
aataaaaattgtgtcaagcagaattcagcagtgcaagtagagaacataatgtacagaaat
ataagaggcacaagtgctacaaaggtggcagtaaacttcaattgcagtgaatcgtttcca
tgcagaaatctttacatggaaaatgtgaaattgaacacacacggagaagatggaaaggcc
gaagcattttgttctcagctcacaatgttgaatgcaggagttaattccttcccacgctgc
agctctgcccataatgattaa
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