Primulina tabacum: 142545767
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Entry
142545767 CDS
T11246
Name
(RefSeq) putative pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142545767
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142545767
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142545767
NCBI-ProteinID:
XP_075509244
LinkDB
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Position
5:complement(4892574..4895771)
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AA seq
379 aa
AA seq
DB search
MGNRHGRFSNHSHRQNPNPTIPPYQFGPTSQFGNLAPKHSTPFTANSNMGLCLPYGHVDS
SLRALADQAEGFGRFAVGGLNGAVYRVITLADDGPGSLRDGCRKKEPLWIIFEVSGTIDL
SSYLNVSSYKTVDGRGQRVKLTGKGLRLKECEHVIICNLLFEGGRGHDVDGIQIKPNSKH
IWIDRCSLKDYDDGLIDITRESTDITISRCHFANHDKTMLIGADPSHVNDRCIRVTIHHC
FFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCSSVESQIYSQCNIYEAGQKKVAFKYYT
EKAADKVQECTGCIKSEGDFFVPGTQPGLVPLASETSVFHPSEFYETWTVEAPTADLKHF
LQHSSGWRNVPRPADLASS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgccatggccgtttctcgaatcacagtcaccgacaaaacccaaaccctacg
attcccccttatcaatttggccccacgtcgcaatttggaaatttagctccaaaacactcg
actccgttcactgcgaattcaaacatgggtttgtgtttaccgtacggccacgtggactcc
agcttgcgggctcttgctgaccaagctgagggctttggccgattcgccgtcggtggtctg
aacggcgctgtttatcgtgtcatcactctcgcagatgatgggcccggttcccttcgtgat
ggatgtcgtaagaaagagcctttgtggatcatatttgaagtttcaggcaccatcgatctc
tcatcttatttaaatgtgtcttcttataagaccgttgatgggcgtggtcaaagagttaaa
ctgactgggaaaggtttgcggttaaaggagtgtgaacatgtgattatttgcaacctttta
tttgaaggaggaaggggacatgatgtagatggaattcaaattaaacccaattcaaagcat
atttggatagatcgttgcagcctcaaggattacgatgatgggctgatagatattacccga
gagagcaccgatattaccatttctcgatgccattttgcgaatcatgataagaccatgctc
attggtgcggatccttctcatgttaacgatagatgtattcgggtcaccattcaccattgt
ttctttgatgggactcgacaacggcatcctcgtgttagatttgggaaagtacatctgtac
aataactatactagaaattggggaatatatgctgtttgctccagtgttgaatcacagata
tattctcagtgcaacatatatgaagctggacaaaagaaggtggcctttaaatattacact
gaaaaggcagctgacaaggtacaggaatgtacaggctgcataaaatcggaaggtgatttt
tttgttcccggtactcaaccaggcttggtgcctctcgcaagtgagacgagcgtcttccat
cctagcgaattttatgagacatggacagtagaagctcctactgctgatctgaaacatttt
ctccaacactcttcaggatggcgcaacgtcccccgacctgccgacttagcgtcttcataa
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