Primulina tabacum: 142545893
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Entry
142545893 CDS
T11246
Name
(RefSeq) F-box protein SKP2B-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142545893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142545893
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142545893
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
DUF7885
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
DUF5445
Motif
Other DBs
NCBI-GeneID:
142545893
NCBI-ProteinID:
XP_075509432
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Position
5:5834423..5836899
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AA seq
372 aa
AA seq
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MRETGEGLGLNFEKLLGFGDVVDVNENKNIVCGGPKISEWKNIPVELLLRILSLVDDPTV
IVASGVCHGWRDAISWGLTHLSLSWCKKNMNNLVLSLVPKFTNLQVLILRQDSPQLQDVA
VETIASYCSDLQELDLSKSFRLTDRSLYALARGCPNLVKLNISGCSAFSDTAVAYLSGFC
RKLKILNLCGCVKAASDRALKVIGYNCDQLQSINLGWCDRVGDEGVKSLAYGCPDLQALD
FCGCVLITDESVIALANNCRHLRSLGLYFCKNITDRAMYSLAHSRVKNKHEMWASVKKNR
YEEEGLTNLNISQCTALTPPAVQALCDSFPALHTCSGRHSLIISGCLSLTSVHCACAVQA
HRTTPAMAHLAH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaacaggagagggtctgggcttgaattttgagaagctgctgggttttggtgat
gtggtggatgtgaatgaaaacaaaaatattgtttgtggaggaccgaagataagtgagtgg
aaaaatattccagtggagcttttgttgaggattctttctttggtggatgatcccacggtg
attgtggcatctggtgtttgtcatggatggagggatgccatttcttgggggcttactcat
ctctccctctcttggtgcaagaagaacatgaataatctggtgctatcactggttccgaaa
ttcacaaaccttcaggtccttattctgcgacaagactcgcctcaacttcaggacgttgct
gttgaaacaatcgcaagttattgtagtgacctccaagagttggatctgagcaagagtttc
aggcttactgatcgttccttgtatgccttagcacgtggctgccctaatctcgtgaagctg
aacataagtggctgttcggctttcagcgatactgctgtggcatatttgtccggattttgc
cgaaaattgaaaatcttgaatctttgtggatgtgtcaaggctgcctcagatagggcattg
aaggtcatcggatacaattgtgatcaattgcagtcgataaacctaggatggtgtgaccga
gttggtgatgaaggggttaagagtttagcctatggttgccctgatctccaagctcttgac
ttctgtggatgtgttcttataacagatgagagtgttatcgccttggcaaacaactgccgt
catctgcgatccctcggtttatacttctgcaagaatatcactgacagagccatgtattct
ctggcacatagccgagtgaaaaacaagcatgagatgtgggcatccgttaagaagaacaga
tacgaggaggaaggccttacgaacctgaacatcagccaatgcactgcccttactcctcct
gcggtgcaggcactctgtgactcatttccagctcttcatacatgttccggtcgccattcc
cttataatcagtgggtgcctgagcttaacttcagtacattgtgcatgtgctgtccaagct
caccgtaccacacctgcaatggctcatctagctcactga
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