Primulina tabacum: 142545926
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Entry
142545926 CDS
T11246
Name
(RefSeq) ABC transporter B family member 13-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
142545926
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptab02000
]
142545926
04147 Exosome [BR:
ptab04147
]
142545926
04090 CD molecules [BR:
ptab04090
]
142545926
Enzymes [BR:
ptab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
142545926
Transporters [BR:
ptab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
142545926
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142545926
CD molecules [BR:
ptab04090
]
Proteins
142545926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
Zeta_toxin
AAA_21
AAA_15
AAA_23
AAA_16
RsgA_GTPase
AAA_5
AAA
DUF87
P-loop_TraG
AAA_30
AAA_24
nSTAND3
G-alpha
NB-ARC
nSTAND1
Rnf-Nqr
ATP-synt_ab
DUF6079
DUF6803
Motif
Other DBs
NCBI-GeneID:
142545926
NCBI-ProteinID:
XP_075509479
LinkDB
All DBs
Position
5:complement(6079897..6085175)
Genome browser
AA seq
1257 aa
AA seq
DB search
MDEVEISKSEQSFEHDEVPGSQKSMDSTSEKQEIVSFFRLFAAADKVDYALMFLGSIGAC
LQGATLPVFFVLFGRMINSLGSLSSDPHRFSSEVSKYSLFLVYLGLVIWLSAWAGVACWT
QTGERQTASLRKKYLQSVLGKNIKFFDTEAGEQNIIFRISSDAILVQDAIGDKICHCICH
LSTFFVGFLLGFCSVWQLTLLTLAIVPLIAVAGGVYTIIMSSLSKKGEDAYAEAGRVAQE
VISQVRTVYSFVGEEKAIEIYSNSLKNGLKLVRKTGIVKGIGIGFTFGLLFCCWALLLWY
ASVLVRNHVTNGGKAFTTILNVIYSGFALGQAAPNLAAISKARAAVTGILKMIGNDSNAS
KSSDEGIVLSRIDGHIEFREVCFAYPSRPAPVFKDLSFSVSAGKSLAIVGPSGSGKSTII
SMIQRFYNPTSGKILLDGNDMEKLRLKWLRSHMGLVNQEPVLFATTIAENILFGEEGANL
EEITEAAKSANAHSFIQSLPNGYRTQVGEGGTQLSGGQKQRIAIARAILRNPKILLLDEA
TSALDSESEFTVQQALNSVMNDRTTIVIAHRLSTVREVGTILVLKNGKIVDKGTHTELMS
KGGDYASLVSMQMSEYKTNPSSDNNTRISGVSSTQEYLDIDNCQQKLKPIVCNDLHKSSD
HKKVPRNLRSPVWELIKLNAPEWPCAVLGSLGAVLTGMETPIFALAITHILTVFYSGDNS
IIKQEVRKISFIFIGAALVTIFIYLLQHYFYTLMGERLIARVRLSMFSAILSNEIGWFDE
DENSTGSLASKLATDATLVRIAIADRISTAVQNMALALTAFVIAFILSWRIAIVVVAVFP
ILIGANIAEQLFLKGFGGDYAKAYYRATEVAREAIANIRTVAAFGAEERMTAKFASELHQ
PRKRALLRGHILGFGYGISLFLAYSSYAVGLWYASVLIKEGKSNFGNIIKSFMILIITAL
AAAETLALAPNFVKGSKVLESVFNILNRSTEIDPENPSSTMVTEIRGDIEFKNVCFKYPT
RPDIIVFDNLNLKVSKEKSMAIVGQSGSGKSTIISLISRFYDTTSGTILIDGCDIKNLNL
KSLRLRIGLVQQEPALFSTTIYENIKYGNRKASEIEIKNAAVAANAHGFISQMPEGYHTQ
VGEKGVQLSGGQKQRVAIARAILKDPAILLLDEATSALDTESEMQVQDAINKLMNGRTTI
LIAHRLSTIRNADLITVLQNGKTVESGSHEQLISRHDSVYFQLVHLQCEQKGVENIE
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgaaatttcaaaaagcgaacaaagtttcgagcacgatgaggtgcccgga
agccaaaaatcgatggattcaacttcggaaaagcaagaaattgtttcattctttaggcta
tttgctgcagcggataaggtagactatgctttgatgtttcttggaagcattggcgcttgc
ttacaaggtgctacacttcctgtattttttgtattgtttggtcgtatgatcaattcttta
ggaagcttgtcttcggatcctcacagattttcttcagaagtgtccaagtattctctattc
ttagtttatcttggattggttatttggttatcagcgtgggccggcgttgcatgttggact
cagacgggggaaaggcaaacagcttcgttgcgaaagaagtatcttcaatccgtgttggga
aaaaatattaagttcttcgatacagaagcaggagagcaaaatataatttttcgcatctcg
agcgatgccatactcgtgcaggatgcaataggagataagatatgccattgcatatgccat
ctttcgacgttttttgtgggatttttgttgggattctgttcggtgtggcagctcacgctt
ctcacattggctattgtccctttaatcgccgttgctggaggagtatatacaataatcatg
tcgtccttgtccaagaaaggagaggatgcatatgcagaggctggaagagtagcacaagag
gttatatcacaagttcgtacggtatactctttcgttggagaagaaaaggccattgaaata
tattctaattcacttaaaaatggcctcaagctggtgaggaagactgggattgtgaaggga
attggcatcggctttacctttgggcttttattttgctgttgggctttacttctttggtat
gccagtgttcttgtaaggaatcatgttacgaatggagggaaagcgttcacaacaatttta
aatgtgatttatagtggatttgcacttggtcaagcggctccaaatcttgctgccatttcc
aaggctcgtgctgcagttacaggtatcttaaaaatgataggaaatgattctaatgcttct
aaaagttcagatgaggggattgtgctgtcaagaatagatggacatatcgaatttcgggag
gtctgtttcgcttacccttctcgacccgctccggttttcaaggatctgagcttctcagta
tctgctggcaagtcattagccattgttggtcctagtggctcggggaagagcaccattatc
tccatgattcaacgattctacaacccaacttcaggaaaaattttgttggatggaaatgat
atggagaaacttcgattaaaatggttaagatcacatatgggattggttaaccaagagcca
gttctgtttgctacaaccatagctgaaaatattttgttcggtgaagaaggcgcaaacttg
gaggaaataactgaggctgcaaaatctgcaaatgcacattctttcatccaaagtttaccc
aatggttatcgcactcaggtaggagaagggggaacgcagctttcaggaggtcagaagcag
agaattgctattgctagagcaatattgagaaatccgaagatactgctactggatgaagcg
actagcgcacttgactcagagtcggaattcacagttcaacaggcactgaattcagtcatg
aatgataggacaacaattgttattgcacacagattatcaacagttagagaggttggcacg
attctcgttctcaagaatggtaaaattgttgataaaggaactcacactgaactgatgtcc
aaaggtggagattatgcatctttggtgagcatgcaaatgtctgaatacaaaacaaaccct
agctcagacaacaatacaagaatatctggagtttccagcactcaagaataccttgacatt
gataactgtcagcagaagttgaagccaatcgtctgtaacgatctgcacaagagtagtgat
cataaaaaagtaccaagaaatttaagaagcccagtttgggaactaatcaaactcaacgca
ccagaatggccatgtgctgtattgggttcattaggcgcagtgcttactggcatggaaact
cctatttttgcccttgcaatcacacatattttaactgtattctacagtggggacaattca
ataatcaaacaagaagtcagaaagatttcttttatattcattggggcggcattggtgact
atattcatatatttgttgcagcactatttctataccttaatgggagaacgccttattgca
cgagttcgcttgtccatgttctcagccattctttccaatgagattggctggtttgacgag
gatgagaatagcactggctcactggcttcaaaattagcaacagatgcaacattagtacga
attgcaatagctgaccgtatatccacagctgtccaaaatatggcactagctctgaccgca
tttgttattgcttttatactaagttggcgtattgcaattgttgtggttgctgtatttcct
attcttatcggtgcaaatatagctgagcaactatttcttaaggggtttggaggagattat
gcgaaggcatactatcgagctacggaagttgctcgtgaagccattgctaatatccgtaca
gtcgctgcttttggagctgaagaaaggatgacagccaaatttgcctctgaactacaccag
ccaagaaagagagctctactacgtggtcatatactgggtttcggctatggtatatctcta
tttcttgcatattcttcttatgcggttggactttggtatgcatctgttctgattaaagaa
ggaaagtcaaacttcggaaacatcattaagtccttcatgatcttgatcattaccgcctta
gccgcagcagaaacgctcgccttggcacctaactttgtaaagggatcaaaagttcttgaa
tcagtgttcaacattcttaatagaagcacagaaattgatcctgaaaatccctcgtccact
atggtgactgagatcaggggagacattgaattcaagaatgtgtgctttaaataccctact
aggccagatataatagttttcgataatttgaacttgaaagtatcaaaggaaaagagcatg
gctattgtaggccaaagcggttcagggaagagtaccataatctctctgatttcaagattt
tacgatactacttcagggacaattttgatcgatggatgcgacatcaagaacttaaacctt
aaatctctgcggttaagaataggtctagtgcagcaagagccagcattattctccacaacc
atttatgaaaatatcaaatacggaaacaggaaagcatcagaaatcgagataaagaatgct
gcagtagcggcaaatgcacatggattcatcagccaaatgccagaaggataccacactcaa
gttggtgaaaagggggtgcaattatcagggggacaaaaacaaagggtagcaattgcgagg
gcgattctcaaggatccagccattcttcttctggatgaagcgacaagtgctctggataca
gaatcagaaatgcaagttcaagatgccattaacaagcttatgaatggaaggacgacgatt
ctgatagcacacaggctttctaccattcgaaatgccgatcttatcactgtgctgcagaat
ggaaaaacggttgaaagtggaagccatgagcaacttattagcagacatgatagtgtatat
tttcagttggtccatttacagtgtgagcagaaaggtgtagaaaacatagaatga
DBGET
integrated database retrieval system
