Primulina tabacum: 142546042
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Entry
142546042 CDS
T11246
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142546042
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
142546042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_19
TPR_12
TPR_14
TPR_16
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_6
TPR_9
TPR_7
TPR_MalT
ARM_TT21_N
ANAPC3
TPR_Slam
TPR_10
ARM_TT21_5th
Fis1_TPR_C
Coatomer_E
ARM_TT21_C
NatA_aux_su
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
142546042
NCBI-ProteinID:
XP_075509643
LinkDB
All DBs
Position
5:complement(7189328..7205550)
Genome browser
AA seq
1115 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETLQREKEDHFIQATQYYNKA
SRIDMHEPSTWIGKGQLLLAKGDIEQAFNAFKIVLDGDHDNVPALLGQACVHFSRGRYSE
SLELYKRALQVYPWAPAVRLGIAFCHYKLGHLEKAKQAFNRALQLDPDNVEALVALGISD
LQTNEAAGIMNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAVTLHG
PTKAHSYYNLARSYHSKGDYEKAGMYYMASVKESNNPRDFVLPYYGLGQVQLKLGDLRSA
LTNFEKVLEVQPENCETLKALGHIYSQLDQIEKAQELFKKATKIDPRDPQAFLDLGELLI
STDIIASLDAFKTARNLLKRGNEEVPLELLNNIGALHFERGEFELADETFNEALGDGVWC
SFFDAGGEPILNLTQSDANGDAPHHEDWPRPSRRRQSSLINNMQYPVDASSTTHHYKDLQ
LFHRLEEHNISVNLPWNKVTTLFNFARVLEQMHDTELANILYRLILFKYPDYTDAHLRLA
AIAKARNNVQLCLELIGDALKADEKGPDVLLMLGDLELKNDDWLKAKETFRNAKDATDGK
DSYAAVCLGNWNYFAANRSERKALKLEATHYEKAKELYTKVLLQHPANLYAANGAGMVFA
EKGQFDIAKELFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYQNCLRKFYY
NTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHMAPSNYTLRFDVGVALQKFSASTLQKSK
RTVDEIRATVVELRNVVRLFSLLSASSNLHLHGFDEKKIETHVAYCKHLLEVANVHCDAA
EREEKQNMQRLEVLRQMELAEESRRKAEEQRKVQLEKRKQEDELKQVMQQEKHLERIKEQ
WKSTNPAPKRKDRSQADDEEGAHGEKKRRGGKRKKKDKKSRYESEEMEAGVEDRENVGYE
DAYADTNTSYGEQYNELNDMEDNQDDIPQDLLAAAGLEDSDAEDVDAASLNMSRRRRALS
ESDDDEPVQGRPAEPDEMESDGEVGVDPGVMVDDE
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgtatatataccggtacagaattcggaggaggaggtgagagtggcccttgat
cagctccctcgcgacgccacggatattcttgacattctcaaagccgaacaagcccctctt
gatctttggcttataattgcgagagagtacttcaaacaaggcaaaattgaacaatttcgg
caaatattagaagaagggtctagtcctgaaattgatgaatattatgcagatgtaaggtac
gagaggatagccattttaaatgctttgggggcttattatagctaccttgggaaaattgag
actttgcaaagagaaaaggaggaccattttatacaggctacacaatattataataaggca
tcaagaattgacatgcatgagccttcaacttggattgggaaaggtcaacttttactggcc
aagggcgatattgagcaggcttttaacgccttcaagattgtattggatggagatcatgat
aatgttcctgctcttcttggtcaggcatgtgttcactttagccgaggtcgctattcagag
tcacttgagttatacaagagagcactgcaagtgtatccttgggctcctgctgtaagactt
ggaatagctttctgccattacaaactggggcatcttgaaaaggcaaagcaagcatttaat
cgtgctttacagttagatcccgacaatgttgaagctcttgtggcacttggaatttcagac
ctccaaacgaacgaagctgctggtattatgaatggaatggagaagatgcagagagctttt
gagatatatccattctgtgcaatggcactgaattatctggctaatcatttcttcttcacg
ggacagcatttccttgttgagcagcttactgaaactgcacttgcagtcactcttcatggc
ccaacaaaggcacattcttattataatttggctcggtcttaccacagcaagggggactat
gagaaagcagggatgtactacatggcatctgtaaaggaaagcaataatcctcgtgatttt
gtgttgccttactatggtttggggcaggttcaactgaaattaggagacctgcgaagtgcc
ttgaccaattttgaaaaggttttggaggttcagccagaaaattgtgagaccctaaaagct
cttggacacatttattcccagcttgatcagattgagaaggcccaagaactattcaagaaa
gccacaaaaattgatccccgagatcctcaggctttcctggatcttggtgaactgttgatt
tcaacagacattattgcctcattggacgcctttaaaaccgctcgtaacctgctgaagagg
gggaacgaggaagtacctttagagctacttaacaatattggggcgctccattttgaaagg
ggagagtttgagcttgctgatgagacatttaacgaagctctaggagatggtgtatggtgc
agcttttttgatgctggaggagaaccgattttaaatttgacacaatcagatgctaatgga
gatgctccacatcatgaagattggccaaggcctagtcgtagaagacaatccagtttaatt
aataacatgcaatatcctgttgatgccagctctactacccatcattataaggacttgcaa
ttatttcatcgactcgaggaacataatatatcagtgaatctcccttggaataaagttaca
acactatttaattttgctagagtactggagcagatgcatgacaccgaattagccaacatc
ctataccgcctgatattatttaagtatccagattacacagatgcgcatttgaggcttgct
gcgattgcaaaagctcgaaacaatgttcaactttgtcttgaactgattggtgatgcactt
aaggcggatgagaagggcccagatgttttgttaatgcttggtgacttggagcttaagaat
gatgactggctgaaggcaaaagaaacattccgcaatgctaaggatgcaacggatggaaaa
gactcctatgctgcagtttgtttgggaaattggaactactttgcagcaaatcgcagtgag
agaaaagctcttaagttggaggctactcattatgagaaagccaaagaactttacacaaaa
gttctgcttcagcatcctgctaacctctatgcagctaatggcgctggtatggtgtttgcg
gaaaaaggtcaatttgatatagccaaggaactttttacacaggtccaagaagctgcgagt
ggaagtttcaatgtccaaatgccagatgtctggattaaccttgctcatgttcacttcgct
caaggaaattttgcattagctgtgaaaatgtatcaaaattgtttgcgcaagttttattat
aatacggacagtcaagtgcttctctacttagcgcgtacacactatgaagctgaacagtgg
caagattgtaagaaaaccttactaagagctattcacatggctccttcaaattacacatta
cgatttgatgtaggagttgctctacaaaagttctccgcatcgacacttcaaaaatcgaaa
agaactgtggatgagatacgagctacagtagtggagcttaggaatgttgtgcgtttgttc
agcttgctgtctgcatcttcaaaccttcatcttcatgggttcgatgaaaagaaaattgaa
actcatgttgcatattgcaagcacttgcttgaagtagctaatgttcattgtgatgccgct
gagcgagaagagaaacagaatatgcaaagactggaagttctgcgtcagatggagctggct
gaagaatcacgcagaaaagcggaagaacagagaaaagttcagctggagaaaagaaaacag
gaggatgagctgaagcaagttatgcagcaggagaagcatttggagcgtatcaaggaacaa
tggaagagtactaatcctgctccaaaacgaaaagatagatcccaggctgacgatgaggag
ggtgcccatggtgaaaaaaagaggagaggtggaaagcggaagaaaaaagataagaaatca
cgctacgaatcagaagaaatggaagctggggtggaagatagagaaaacgtgggttatgaa
gacgcatatgcagacaccaatacgagctatggagagcagtataatgaattgaatgacatg
gaagataaccaagacgacattcctcaggatctccttgctgcagctgggctcgaagattca
gatgctgaggatgttgatgctgcatctttgaacatgagtcgacgaagaagggctttgtca
gaatctgatgacgatgaaccagtgcagggacggcctgcagagccggatgagatggagagc
gatggagaagttggagttgatccaggcgttatggttgatgatgaataa
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