Primulina tabacum: 142546302
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Entry
142546302 CDS
T11246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142546302
03015 mRNA surveillance pathway
142546302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142546302
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142546302
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
142546302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
142546302
NCBI-ProteinID:
XP_075510063
LinkDB
All DBs
Position
5:complement(9511047..9516646)
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AA seq
495 aa
AA seq
DB search
MADKESTSSAADIVSAAAKPPETKRWADVAEEAEEDQEKAESSSTEVGLDSLAIDESKLV
DNVLTDPDDSRIEAVTSGDTPYTSAKRFEDLNISPELLKGLYVEMKFEKPSKIQAISLPM
ILTPPHKNLIAQAHNGSGKTTCFVLGMLSRVDTHLKAPQALCICPTRELAIQNMEVLLKM
GKFTGITSELAIPSDPANYIPIQKRPPITAQVIIGTPGTICKWMLAKKLGMSQLKILVYD
EADHMLAESGFRDDSVKIMKAILKSNANCQVLLFSATFDDAVKAFASKIVEEIFVQDYNQ
LFVKKEELSLESVRQYKVHCPDELSKIMVIKDRILELGEKVGQTIVFVRSRNSASNLHQS
LISLGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLLARGFDQKQVNLVVNFDLPV
KYDRPSEPDYEVYLHRVGRAGRFGRKGAVFNLLLNHRDDMIMGKIENYFNAQITEVGPWN
SDKEFETALTNAGLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaagagtcaacctccagcgccgccgatattgttagcgccgccgcaaagcct
ccagagacgaagcggtgggctgatgttgctgaagaggcggaggaggatcaagaaaaggcc
gaatcttcatcgaccgaagttggtttagattcgttggctatcgacgagtccaaactagtt
gataatgtgctcaccgatccggatgactccagaattgaagctgttacgtcaggggacact
ccatatacttctgctaagagatttgaggacctgaacatatcacctgagttactgaagggt
ctatatgttgaaatgaagtttgagaagcctagcaagatacaagcaataagtttgccaatg
attttgactcctccacacaagaatttaattgctcaagctcacaatggttctgggaagacc
acgtgttttgtgcttggtatgttgagccgtgttgatacacatttaaaggctccccaggct
ctttgtatctgccctaccagagagttagccattcagaatatggaagtgcttctgaagatg
gggaagttcactgggataacctcagaattagcgataccatcggatccagctaattacatt
ccaattcaaaagagaccacctattacggcacaagttattattggtacacctggtacaata
tgtaagtggatgttagcgaagaaactaggcatgagccaactgaagattctggtgtatgac
gaggcagaccacatgctagcagagagtggttttcgagatgattcggtgaaaataatgaag
gcaattttgaagagtaatgccaattgccaggtgcttctcttctcagccacgtttgatgat
gccgtgaaggcctttgcatcaaagattgttgaagaaatctttgtccaagattataaccag
ttgtttgtgaaaaaggaagaactgtctttagagtctgtcagacagtataaggtacattgt
cctgatgagctttcaaagatcatggtgatcaaagacagaatacttgaacttggagagaag
gtgggacagacaatagtttttgtccgatctaggaatagtgccagtaatttacaccagtcc
ttaatcagtctgggctatgaggtcactacaattcaaggtgcattgaaacaagaagacagg
gacaaaattataaaggagtttaaggagggattgactcaagttcttatttcgaccgatctt
cttgctcgaggttttgatcagaagcaggtcaatttggtcgtcaattttgatcttcctgtg
aaatatgacagaccttctgagcctgactacgaagtttacttgcatcgggttggtcgagct
ggacgatttggccgcaaaggtgctgtattcaacttgcttctcaatcatagagatgacatg
attatgggcaagattgagaattacttcaacgctcagataactgaggtgggtccgtggaac
agcgacaaggaattcgaaaccgccttaacaaacgcgggtctgctataa
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