Primulina tabacum: 142546354
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Entry
142546354 CDS
T11246
Name
(RefSeq) putative pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142546354
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142546354
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF7044
Motif
Other DBs
NCBI-GeneID:
142546354
NCBI-ProteinID:
XP_075510147
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Position
5:9904588..9906795
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AA seq
357 aa
AA seq
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MYICVYVCIDSGCSTTKISTPFGELDMGLSLPYGHVDSSLRALSGQAEGFGRSAVGGQNG
AVYRVTTLADDGPGSLRDGCRKKEPLWIIFEISGTIKLSSTLSVSSYKTIDGRGQKIKLT
EKGLRLKECEHVIICNIILEGGRGHDVDAIQIKPKSKHIWIDRCSLSDYSDGLIDITLES
TDITVSRCHFSNHDKTILIGADPSNTCDRCMRVTIHHCFFDGTRQRHPRVRFGRVHLYNN
YSRCWGIYAVCASVDSQIYSQRNIYEAGQKKVAFKYLMEKAADKADECSGCIISEGDLFV
CGTQSGLKPLPTETCVFRPCEYYQTWTAEAPTEDLKHFLQHCTGWQRIPLPVETPCS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtatatatgtgtatatgtatgtatagactcgggatgttccacaacaaaaatctccacc
ccatttggagaactcgacatggggttgagtttgccttatggccatgtcgactccagcttg
cgggctttatccggacaagcagagggcttcggccgctccgcagtcggagggcagaacggt
gccgtttatcgtgtcaccaccctcgccgatgatggaccaggttcactacgtgatgggtgc
cgcaaaaaagaacctttatggatcatctttgaaatttcgggaaccatcaaactctcctca
actttaagtgtatcatcctacaaaacaatcgatgggcgcggccagaagattaaactcact
gaaaagggcctaagattaaaggagtgtgagcatgtgataatatgcaatatcatcctcgaa
ggtggcagaggacacgacgtggatgcgattcagatcaagccaaaatccaagcacatatgg
atagatcgttgcagcctcagcgattactctgacggactgatagatatcacactcgaaagc
accgatattacagtttctcggtgccacttctcgaatcatgataaaacgatacttatcggg
gcggatccttccaacacctgtgacagatgtatgagggttacaattcaccattgtttcttt
gatgggactcggcagaggcacccaagggttcgattcgggagagtacacttgtacaataac
tatagcagatgttggggaatttatgctgtttgtgcaagtgttgactcacagatatactca
caacgcaacatatatgaagctggacaaaagaaggtggcctttaaatatctcatggagaag
gcagcggacaaggcagacgaatgcagtgggtgcatcatttccgaaggcgacttgtttgtt
tgtggaactcagtctggcttaaagccccttccgactgaaacttgtgtgtttcgtccctgc
gagtactaccagacctggaccgcggaagctcccacagaagatctcaaacattttcttcaa
cactgcacagggtggcaacgcatccctcttcctgttgaaacaccatgttcctga
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