Primulina tabacum: 142546414
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Entry
142546414 CDS
T11246
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptab01009
]
142546414
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142546414
Enzymes [BR:
ptab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
142546414
Protein phosphatases and associated proteins [BR:
ptab01009
]
HAD phosphatases
Fcp/Scp phosphatases
142546414
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
142546414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
142546414
NCBI-ProteinID:
XP_075510225
LinkDB
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Position
5:complement(10490453..10500759)
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AA seq
770 aa
AA seq
DB search
MSRVGFKSSVYHGDVFLGELDNVPVKGVNFQFAKNEIRIHHISPNSERCHPLAVLQTISA
ASIRCKLEPGANSSLSSNPDESPLINLHASMFYEFKTAVVLLGNEEVHLVAMPSKQKKFP
CFWCYSLPRGLYNSCLWMLNMRCLAIVFDLDETLIVANTMKSFEDRIEVLMDWIAREGDP
IRESGMTAEMKRYVEDRALLKQYAETDNVMDGGILFKYQQEEVPLLSDGHVRVVRPVVRL
PERSIVLTRINPENRDTSVLVRLRPAWLDLKNYLTAKGRKRFEVYVCTMAERDYALEMWR
LLDPEAHLISSKQLLERVVCVKSGARKSLLNVFQDGKCHPKMAMVIDDRLKVWEEKDQPR
VHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGGFFKEFDEHLSRRISDIFYEHEVV
NLPCAPDVSNYLMSEDAGPITNGSSSVPIAEGINGPEVAQNLQYLDDKNTTNSVSHSMDN
LTEFKPESSKLPTVSIANVIASASERAISTSEKPSLLGDPLRRENMHSGSTEQPLLPKLP
RQEPLLPPQGGLTGKNANRGPVSGQVPGIIPCDPPDRQQGHQNSLSHSTLSSVHAEMLRV
SQSKNEEAKMRCDIQKQNLLPPRQLADFGAAQNQISYSKGLKTDDDIINMLPTLSIGVLQ
EIGRKCRSKVEFRPVVSASDNLQFSVEVFFTGEKIGVGMGRTRKDAQQQAAENALRSLAD
HYVAYIAPHSRSLDNDCDGNVLERENGFLWDTVKPVPEQQSLKNGFPQVK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgagtagggtttaaatcatcggtttatcacggggacgtgtttttgggggaactg
gacaatgtcccggtgaagggtgtgaatttccagtttgccaagaatgagataaggattcac
cacatctctccgaacagtgagagatgccacccactcgccgttctgcagacaatttcggcc
gcttctatacggtgcaagctcgagcctggagctaattccagtctgagttccaatcctgat
gagtcgccattgatcaatctccacgcgtctatgttttacgagttcaagactgctgttgtg
ttgcttggtaatgaggaagttcatttggtggcaatgcctagtaagcagaagaagttccct
tgtttttggtgctactcattgccccgtggtttatacaattcatgtttatggatgttgaat
atgcgctgtttagcaattgtctttgatcttgatgaaactctcattgtggccaacacaatg
aagtcatttgaggatagaattgaagttttgatggactggattgcacgtgagggtgaccct
attcgggaatctgggatgacggctgagatgaagagatatgtagaggatcgtgcattgctg
aagcagtatgcagagactgacaatgttatggatggtgggatactatttaaataccagcag
gaggaggtgcccctgctatctgatggacatgtacgggttgttcgtcctgttgtaaggttg
cctgaaagaagtattgttcttacacgtattaatcctgagaatagagatactagtgtgcta
gtcaggttacgacctgcttggctagatttgaaaaattatttgactgcgaaaggccggaag
agatttgaagtttatgtttgcaccatggctgaaagagattatgcattggaaatgtggagg
ctgcttgatccagaagcacacttaattagctcaaaacaactgctcgagcgtgttgtatgc
gtgaaatcaggggctaggaaatctttgcttaatgtcttccaggatggcaagtgtcatcca
aagatggcaatggtaattgacgatcgtttaaaggtttgggaagaaaaggatcagcctcgt
gttcatgtagttcctgcatttactccatactatgccccacaggctgagactgcaaatgct
gtgccagtcctttgtgtagcgagaaatgttgcttgcaatgttaggggtggttttttcaag
gagtttgatgaacatctatcccgaagaatatcagacattttctatgagcatgaggtggta
aatttaccttgcgcaccagatgtgagcaactacttgatgtccgaggatgctggtcctata
acaaatggaagttcaagtgttccgattgctgaaggaataaatggaccggaagttgcgcaa
aacttgcagtatttggatgacaaaaatactacaaattctgtttctcattcaatggataat
ctcactgagtttaagcctgaaagctccaagctccccactgtatctattgcaaatgttatt
gcttcagcatccgagagagcaatatcaacatctgaaaaacctagtttgcttggcgatcca
cttcgaagagagaatatgcattcaggttccacagaacagcctctgttgcctaaattgcct
cgacaggaacccctcctaccgccccaaggaggtttaaccggaaaaaatgctaacagaggg
cctgtcagtggccaagtgccaggaataattccatgtgatccaccggataggcaacaaggt
catcaaaactcactcagtcacagcacattgtcttctgttcatgcagaaatgttgcgtgtt
tctcaatcaaagaatgaagaggctaagatgaggtgtgatattcagaaacagaatcttcta
ccaccaaggcagcttgcagattttggtgcagctcaaaaccagatatcctacagtaaagga
cttaaaacagatgatgatattataaacatgttaccaacgttgtcaattggtgtgcttcaa
gagattggaaggaaatgcaggtcaaaggttgaattcaggcctgttgtcagtgccagcgac
aatttgcagttctcagttgaggttttctttactggtgaaaaaattggcgttgggatgggc
aggacaaggaaagatgcccagcaacaggctgcggagaatgcccttcggagcttggctgat
cattatgtagcttatattgcacctcattctagatctctggataatgattgcgatggaaat
gtacttgagagggaaaatgggtttctgtgggacactgtgaagcctgtaccagaacaacaa
tccttgaagaatggttttccccaagtaaagtaa
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