Primulina tabacum: 142546547
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Entry
142546547 CDS
T11246
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142546547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142546547
Spliceosome [BR:
ptab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
142546547
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Bee_toxin
Motif
Other DBs
NCBI-GeneID:
142546547
NCBI-ProteinID:
XP_075510426
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Position
5:complement(11558542..11567152)
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AA seq
411 aa
AA seq
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MSEIKSAGRSIDLLLEKVLCMNILSSDYFRDLLRLKTYHEVIDEIYTTVTHVEPWMTGNC
RGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADSKTLWGWYEPYL
KDDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRTIVTNLENMKLPSKHC
GTTGESTRGSEETARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRTITPSYDRDADSRR
SPHHHRGQSHDLSDRECSDRDKDRERERDMNKDRFRDRDRDHERHKDRDRDRYRERERDR
DRDRRHEYDRRSRNGYGRDYERSENEGHRLREGSSRHSRSRSRSRSRSQSIHERSGHDQN
REKASASSNLAKLKDLYGDLNDQKEDAGKDRGPSRPSGTEEVIRLGGSTWR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagattaaatcagctgggagatcaattgatctactgttggaaaaggttctgtgc
atgaatatactttcttctgattactttcgagaccttttgagattgaaaacatatcatgaa
gtcattgatgagatttatacaacggtgacacatgtggaaccttggatgactggcaattgt
cgggggccttcaactgcattctgccttctctacaaattctttacgatgaaactcaccgtc
aaacaaatgcatggcctgttgaagcacccagattctccttacataagagctattggattt
ctatatttaagatatgttgcagattcaaagacattatggggttggtacgaaccataccta
aaagatgatgaggaattctctcctggttcaaacggccgaatgaccacgatgggtgtgtat
gtgcgcgatttgcttcttggacagtattactttgacactcttttcccacggatccctgtt
ccagttttgcgaaccattgtgacaaatcttgaaaatatgaaactgccatcaaaacattgt
ggaactactggtgagtccactcgtggatctgaggagactgccaggaggccaccttctgtc
aaagcttccctttcagtctcttttggtcagcgtgctccacatcgtgcatcaactaggggt
tcatctccagttcgccgaacaataactccatcgtatgatagagacgccgattctagacgg
tccccccatcaccataggggccagagccacgatttgtcagatcgagaatgttcagacagg
gacaaagaccgagagcgggaaagagacatgaataaggatcgtttccgtgatcgtgacagg
gaccatgagagacataaggacagggatagagaccgatatagagagcgggaaagagataga
gatagagataggaggcatgaatatgatagaagatccagaaatggctatggaagggattat
gaaaggagcgaaaatgaagggcatcgtcttcgagaaggtagttctcgccatagtcggagc
cgtagcagaagcaggagcagaagtcaaagcattcacgaaaggagtgggcatgatcaaaat
cgggaaaaggcatctgcatctagtaatttagccaaacttaaggatctatatggtgacttg
aacgaccaaaaggaggatgcaggcaaagacaggggtcctagccggcctagtggtactgag
gaggtgatcagacttggtggttcaacgtggaggtaa
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