Primulina tabacum: 142546562
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Entry
142546562 CDS
T11246
Name
(RefSeq) putative pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142546562
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142546562
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Tsr0524-like
Motif
Other DBs
NCBI-GeneID:
142546562
NCBI-ProteinID:
XP_075510456
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Position
1:50427924..50429875
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AA seq
401 aa
AA seq
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MGIPLFTLMLPLLLVPLLTLSSPIPDPELIVREFNEKVNASRRNLGVLSCGASNPIDECW
SCDPNWKNNRKQLADCAIGFGRQAIGGRDGKIYVVTDAGDDAVNPKSGTLRYGCIQSEPL
WIVFSRDMVIKLKQELMITSFKTIDGRGVSVHIANGPCITLQYVTNVIIHGINIHDCKQG
GNAYVRDSTKHFGWRGLSDGDGVSIFSSSNIWIDHCSLSNCQDGLIDAIRGSTAITISNN
YMTHHDKVMLLGHSDSYTRDKAMQITIAFNHFGEGLIQRMPRCRHGYFHIVNNDYTHWRM
YAIGGSASPTINSQGNRFLAPDDRDHKEVTKHETAPQSQWKKWSWRSEGDLMLNGAFFTL
SGAGASSNFAKASSLSARTSSLVSSMTARAGVLNCKEGNAC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcccacttttcactctaatgttacctcttcttttggttccacttctcacatta
tcttccccgattccagaccctgaactaatagtgcgagaatttaacgaaaaagttaatgca
tcaagaaggaatttgggagttctatcctgtggagcaagcaaccccattgacgaatgctgg
agttgtgaccctaattggaaaaacaataggaagcagttggcagattgcgcgatcgggttt
ggaagacaggccattggtggaagagatggcaagatttatgtagtgacagatgctggagat
gatgcggtgaatccgaaatcggggactctgagatatggttgcatccaaagcgagcctttg
tggatcgttttttcgcgagatatggtcatcaaactcaagcaagaactcatgataacctcg
ttcaaaacaattgacggcagaggtgtgagtgtgcacatagctaatgggccatgcataacc
cttcaatatgttacaaatgtcatcatacatggcatcaacatacatgactgcaagcaaggg
gggaatgcttatgttagggattctactaaacattttggatggagaggcttatcagatggt
gacggggtgtctatattcagttccagcaatatttggatcgatcattgctcgttgtctaat
tgccaagatggcctcatcgacgccatacgtggctcgacagccatcaccatttcgaacaat
tacatgacacatcatgataaggtcatgctcttggggcatagtgatagttacacacgtgat
aaagctatgcaaatcaccattgccttcaaccatttcggagaagggctcattcagaggatg
ccaagatgcaggcatggctatttccacattgtgaacaatgactacacacattggcgaatg
tatgctattggtggcagtgcatcccctactatcaacagccaaggcaatagatttcttgct
cctgatgatagggaccataaggaggtgaccaaacatgagaccgctccacaaagccagtgg
aagaaatggagctggagatcagaaggcgacttgatgctaaatggcgcattcttcacgctt
tctggtgctggagcctcgtctaatttcgccaaagcatcaagcttgagcgcgagaacatcg
tccctcgtgagctcgatgacagcaagagcaggcgtactcaactgtaaagaaggtaacgcg
tgttga
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