Primulina tabacum: 142546709
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Entry
142546709 CDS
T11246
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptab03000
]
142546709
03036 Chromosome and associated proteins [BR:
ptab03036
]
142546709
Transcription factors [BR:
ptab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
142546709
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
142546709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
HMG_box
Rttp106-like_middle
HMG_box_2
HMG_WDHD1
CDC45
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
142546709
NCBI-ProteinID:
XP_075510686
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Position
5:12815737..12820908
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AA seq
642 aa
AA seq
DB search
MADGHSFNSISLGGRGGTNPGQLKVHSGGIVWKKQGGGKAVEVDKSELLALTWMKVPRSN
QLGVRTKDGLHYKFTGFRDQDVAGLTAFFQSNYGKTPEEKQLAVSGKNWGDVDLNGNTLT
FLVGGKQAFEISLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFI
GDENRPSAQVFRDKIVSMADVGAGGEESVVTFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRVFWLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDSVMDTTLSMS
DELYQTKYKDKLNPEHKGLVHEVFITILRGLSGAKITKPGNFRSNQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHTAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHSLFDFISIKGLKIMNLGSAKTAEGVAAVLQSDDDDAVDPHLERIKNEAAGDESDE
EDEDFVADKDDGGSPTDDSGQGGSDGSDSGEEKEVPIKKKLKKEPSFKASSSRKKTKDGD
EDGSKKKKQKKKKDPNAPKRAISAFMFFSQTERENVKKNNPGISFTEVGKELGDRWNKLT
AEDKAPYEAKARADKKRYSEEIKGYKNPQASTMGLAEESDSE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtcactccttcaacagtatctctcttggcggtcgtggcggaacaaatcct
ggtcaacttaaagttcactccggtgggatagtatggaagaaacaaggaggtggcaaggct
gtggaagttgataaatctgagttgctcgcccttacctggatgaaggtccctcgatctaat
caactaggtgtccgaaccaaagatggtcttcactataaatttacaggttttcgggaccag
gatgttgccggtctgactgcgtttttccaatccaattatgggaaaacaccagaggagaaa
cagctcgctgtgagtgggaaaaattggggagatgttgatttaaatggtaatacactcaca
tttctagttggtggtaagcaagcatttgagatatctttagctgatgttgcacagacccaa
cttcaagggaaaaatgatgtcatgttggaatttcatgtggatgacacaactggagctaat
gagaaagattccttaatggaaatcagttttcacatcccaaattcaaacactcaattcatc
ggtgatgaaaatcgcccttctgctcaggtgttccgagacaagatagtgtcaatggctgat
gttggagccggaggtgaagaatctgtcgttacttttgatggaattgccatccttactcct
aggggacgatacaatgttgaacttcatctctcatttttgcgtctccaagggcaagctaat
gatttcaaaattcagtacagcagcgttgttcgtgttttttggttgcctaagtctaaccaa
cctcacacctttgtggttgttactcttgacccgccaattcggaagggccaaactttatat
ccacatatagtgatgcagtttgagacagactctgttatggacaccaccttgtctatgagt
gatgaactttaccagaccaagtataaggacaagcttaatccggaacacaagggactggtg
catgaagtctttattacaattcttcgtggtttgtctggcgccaaaatcactaaacctgga
aatttccgcagcaatcaggatggctatgctgtgaagtcatccctgaaagctgaagatgga
gttctttatcccctcgaaaagagctttttctttttacccaaaccacccactctcattctt
cacgaggagattgactacgtagagtttgagaggcatactgctggaggttcaaatatgcac
tactttgatcttctcattagacttaagactgagcaggagcaccttttccgaaacatacaa
agaaatgagtaccattcactttttgacttcattagtatcaagggcctgaagattatgaac
ttggggagtgccaagactgcagagggagtagcagctgttctgcagagtgatgatgatgat
gctgttgacccgcatcttgagcgcatcaagaatgaagcagctggagatgagagcgatgaa
gaggatgaagattttgttgccgacaaggatgatggaggctcccctacagatgattcaggg
caaggaggatctgatggcagtgacagtggagaggaaaaagaggtaccaattaaaaagaaa
ctcaagaaagagccttctttcaaagcatcgtcaagtaggaaaaaaactaaagatggtgac
gaagatgggtcaaagaagaagaaacagaagaagaaaaaggacccaaatgcaccaaagagg
gccatcagcgcctttatgttcttctcccaaacagaaagagagaatgtgaagaaaaacaac
cctgggatttcattcacggaggttgggaaagaacttggggataggtggaataagctgaca
gctgaggacaaagccccatatgaagcaaaagcacgggcggataaaaaacgttatagcgag
gaaatcaagggctacaagaacccacaggcctcaaccatggggttggcagaagaatctgac
agtgagtaa
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