Primulina tabacum: 142546717
Help
Entry
142546717 CDS
T11246
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142546717
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
142546717
REST complex
142546717
Heterochromatin formation proteins
Other heterochromatin formation proteins
142546717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
142546717
NCBI-ProteinID:
XP_075510699
LinkDB
All DBs
Position
5:12886981..12898423
Genome browser
AA seq
1403 aa
AA seq
DB search
MKRLRDEVYVNPQFKRPFGPSSRGESYGPPHAPIGVVGGGGGGGGGGGGGGGSGTVGGGG
GGGGGGVNGIGGGGGGTATLGGGSTTGVASGSTQKLTTNDALTYLKEVKDMFQDQREKYD
RFLDVMKDFKAQRIDTAGVIARVKELFKGHPNLILGFNTFLPKGYEITLTDEEEAPPKRT
VEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKEHKGITEVYQEVAALFNDQPDLLD
EFTRFLPDSSATASAPHASFNRPFPRYDERSSAMPTMRHSLMDKQRPRRDRIISPHGERD
LSVERPDMDDEKTVVKLHKDQKKHVDKENRDKRNRDQEDRDPENENNGDISMHRLSDKRK
SAKKVGDFGGNSNLTSYEDKDALKSMYSQEFTFCEKVKERLGSEEDYQAFLKCLHIYSTE
IITRKELQGLVADLLGKYPDLMEGFNEFFEHCERIDGFLAGVMGKKTLWTEENSSKALKI
EDKEKEQRREVESGKEKERYNLKYWGKSIQELDLSDCRSCSPSYRLLPDDYPIASASQRS
ELGALVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAE
ELLNGINSNSIGSDGPTRIEDHFTALNLRCIERLYGDHGLDVMDILRRNSSLSLPVILTR
LKQKQEEWTKCRSDFNKVWAEIYSKNHYKSLDHRSFYFKQQDSKNLGTKSLVAEIKEIKE
KRQKEDDVLLGVSAGNRHSIIPDLEFEYTDSEIHEDVYKIIKYSCEEVCSTKEQFNKVLR
FWTTFLEPILGIHSRPLGSDVTEDDGVSKCQTIKNTWTNIVESEGSPNADGSATILKQPN
PICNGSPTSTHRLNFSRTGITNVDSLAKEGLPAVSGERLTNPDVPVTFGSDANHGRGANS
VQTHNDPIEEDNVSKLNAEDIPHGGDSSRLNQPTNGESTEGTRLVGYNEDSVDPGKNEKE
EGELSPNGDFEDNFGAYQDGSSQALPDKIRGNDKTQSQTGHHEEICPDAAGENDNDADAD
ADADDEDSENVSEAGEDVSGSESAADECSREEHEEEDDGEPDDIDGKVESEGEAENTSEA
HYIGGDGASVSQSEHFLRSCKPLSKRVAYPSVGEEKKDRRIFYGNDTFYVLFRLHEKLYE
RILSAKVNSLSCESKWRNTKDESIDPYSRFMSALFRLLDGSSDNTKFEDDCRSLIGNQSY
VLFTLDKLIYKLVKQLQTVSSDEVDIKLLQLYEYEKSRKPEKYVDSVYYENVRIFLHEEN
IYRLECSSTPTHLSIQLMDDGSEKSEVVAVSVDPSFATYLRNDYLSVDRGKKESSAIMLK
RNMLKYANLEESAALFMATENVLIMNGLECKMSATSSKIFYVLDTEDFFIRLGRRRKNTP
AGTYSLKNQQRVQRFHQFMSASV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattgagagatgaggtgtatgtgaaccctcaatttaagcggccattcggccct
tcttctcgaggagaatcatatgggcctccacatgctcctattggtgtagtaggcggaggc
ggaggcggaggaggaggaggtggaggtggtggaggcagtggtacagtcggaggtggaggc
ggaggaggaggaggtggagtcaatggaattggtggtggtggtggtggtactgctactcta
ggtggtggtagtactactggagttgcttctggtagcacacaaaaacttaccaccaatgat
gcactaacatatttgaaggaagtcaaggatatgttccaagatcagagggaaaaatatgat
aggttccttgatgtcatgaaagatttcaaggctcaaagaatcgatactgctggtgttata
gctcgggtgaaggaattgttcaaagggcatccgaatctgattcttgggtttaacaccttc
ttgcctaagggatacgaaattaccctcaccgatgaggaagaggctccaccaaaaaggaca
gttgaatttgaagaggctatcagttttgtcaataagattaagaaacgctttcaaaatgat
gatcatgtttataagtctttcctagacattttgaatatgtaccggaaagaacacaagggt
atcactgaggtctaccaagaggttgcagcactttttaatgaccagccagatctccttgat
gaattcactagatttcttccagattcttcagctactgcatcagctccacatgcatctttt
aaccgtccttttcctcgttatgatgagaggagctctgccatgcccacaatgagacattct
ctcatggataagcaacgaccacgacgggatcggatcattagcccccacggagaacgtgat
cttagtgttgagcgtccagatatggatgatgaaaagacagttgtgaagttgcacaaggat
caaaagaagcatgtagacaaggagaacagggataaaagaaatcgtgatcaagaagacaga
gaccccgaaaatgaaaacaacggagacattagcatgcatcggctctctgataaaaggaaa
tctgccaagaaagttggagactttggaggaaactcaaatctcacatcctacgaggataaa
gatgcattgaaaagtatgtacagtcaagagttcactttctgtgaaaaagttaaagagagg
cttggcagcgaagaagattaccaggcatttctgaaatgtcttcacatttacagcacagaa
atcattacaaggaaggagttgcagggtttggttgctgatttacttggaaaatatcctgac
cttatggagggatttaacgaatttttcgaacactgcgagagaattgatggatttctagct
ggtgtcatgggcaaaaaaacattatggaccgaagaaaattcttcaaaagccttgaaaata
gaggacaaagagaaagaacaaaggcgcgaggtagaaagcgggaaagagaaggagagatac
aatttaaaatactggggaaagtccattcaagaacttgacctttctgattgtcgaagttgt
tctcccagttataggcttcttcctgacgattatccgatagcttcagctagtcagaggtcg
gagcttggtgcactagttttaaatgatcattgggtgtctgtgacctccggtagtgaggat
tactcctttaaacacatgcgcagaaaccagtatgaagaaagcctgtttagatgtgaagat
gatagatttgagcttgacatgttgttggagtctgtcagttcaactgccaagcgtgcagag
gaacttttgaacggcattaacagtaattcaattggttcagatggtcccacacgtattgag
gaccatttcacagctctgaatttaagatgtattgaacgactatatggtgaccatggtctt
gatgtgatggatattttgcgtagaaattcatctctttcgttgccggttatcctgacccgc
ctcaagcagaagcaggaggagtggaccaagtgccgttcagattttaataaagtttgggct
gaaatatattctaaaaaccattacaagtctcttgatcaccgcagtttctatttcaagcaa
caagattcaaagaatttgggcacaaaatcattagtggcagaaatcaaagaaatcaaggag
aaaagacaaaaagaagatgatgtgctacttggcgtttccgctggaaataggcactctatc
attccagaccttgaatttgaatatactgattctgaaattcatgaagatgtctataaaatt
atcaagtactcgtgtgaagaggtctgctcaacaaaagagcaattcaataaagttttgaga
ttctggaccacttttctcgagccgatactgggtattcactcccgccctcttggttctgat
gttactgaagatgatggtgtctctaagtgtcaaaccattaaaaatacctggacaaacatt
gtagaaagtgaaggaagtccaaatgccgatggtagtgccacaatcttgaagcaaccgaat
cctatctgcaatggcagtcctacttcaacgcaccgattgaatttcagcaggactggcatc
acaaatgttgattcccttgctaaagagggactacctgctgtatctggtgaaagattaaca
aaccctgatgtacctgtcacatttggatcagatgctaatcatggtcgcggagcaaattct
gtacaaacacataatgatccaattgaggaagacaatgtatccaagcttaatgcagaagat
ataccacatggcggggactcatcaagattgaatcaaccaacaaatggggagtccacagaa
ggcacccgacttgttggatataacgaggattctgttgaccctggtaaaaatgagaaagaa
gagggcgagttgtctccaaatggtgattttgaagacaattttggtgcctatcaggatggt
agttcacaagccttgcctgataaaattcgtggcaatgacaagacccaaagtcagacaggc
catcatgaagaaatttgcccagatgctgccggtgaaaatgataatgatgctgatgctgat
gctgatgctgatgacgaggacagtgagaatgtttctgaggcaggagaagatgtttcaggt
agtgagtctgctgccgatgagtgttcgcgagaagaacacgaggaagaggacgatggagaa
cctgatgacattgatggcaaagtggagagtgaaggtgaggcggagaatactagtgaagct
cactatattggaggagatggtgcatctgtgtcacagtctgaacatttcttgcggagttgt
aagcctttgtcaaagcgtgttgcttatccatctgtgggcgaggagaaaaaagatcgacgg
atcttttatggaaatgacaccttttatgtgcttttcaggctgcatgagaaattgtatgaa
aggatattatcagctaaggtgaattcattatcttgcgaatccaaatggagaaacacgaag
gatgaaagtattgatccctactccaggttcatgagtgcattgtttaggttacttgatgga
tcttctgataatactaaatttgaagatgattgtcgatcactgattggaaaccagtcatat
gtgctctttaccttggataagttgatatataagttggtcaaacagctccaaactgtttcg
agtgatgaagtggatattaagctgcttcaattgtatgaatatgaaaaatctaggaagcca
gaaaagtacgtcgattcggtttattacgaaaacgtccgaatttttttgcacgaagagaat
atatacagacttgaatgttcatcaactcctacccatttatctatacaactgatggatgac
ggaagtgagaagtctgaagtcgtggcagtctcagtggatcctagtttcgcaacttatctc
cgtaatgattatctttcagtcgatcgaggaaaaaaggagtcatccgcgattatgctgaag
aggaatatgctcaaatatgccaatcttgaagagtctgctgctctatttatggccacagaa
aatgttttgatcatgaatgggttggaatgtaagatgtcagcgacttcgtcgaagatcttt
tacgtccttgacaccgaggacttctttattcgtttgggacgcagaaggaaaaacacacca
gcaggaacatattcccttaagaaccagcaacgggtgcaacggtttcaccaatttatgtca
gcctctgtatga
DBGET
integrated database retrieval system
