Primulina tabacum: 142546721
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Entry
142546721 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase homolog MER3
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142546721
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
142546721
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Meiosis-specific proteins
Others
142546721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
AAA_22
DNA_pol_lambd_f
IMS_HHH_1
HHH
T2SSE
Motif
Other DBs
NCBI-GeneID:
142546721
NCBI-ProteinID:
XP_075510703
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All DBs
Position
5:12920643..12928733
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AA seq
1195 aa
AA seq
DB search
MDSYTLKAVNDLPVLFRSAFNFRYFNSLQSECFSTCFQSDVNMVISAPTGSGKTVLFELC
IMRLLSKFIGTDGNFIHLKGTLKTIYIAPSKALVQEKLRDWTQKLGPLGIKCLEMTGDSE
FYSISNIQEADIILTTPEKFDAATRYRIKDGGLSFFSDIALVLIDEVHLLNDPRGAALEA
IVSRIKLLACNPEMRSSSLSHVRFLAVSATIPNINDLAEWLVTPSQGIKRFGEEMRPVKL
TTKVLGYARAKNDFLFEKSLQNYIFDLLKQYSGGKSALIFCSTRKGAQEAAQRLSQIAMT
FGNSSPFIKGREEQERLREASLSCGDKQMQSYMLYGVGYHNGGLALKDRNLIEGLFLNGD
LQILCTTNTLAHGINLPAHTVIIKSTQYFNKEKGTYMEYDRSMVLQMCGRAGRPPFDDTG
MVIIMTRKETVHLYENLLNGCEMVESQLLPCVTEHLTAEIVQATVSDITMAIEWMKCSYL
YVRMKKNPENYSILKGLSGDRIEKHLQEICVQKVNELSQYQMVWTDEDGFLLKPLEPGRL
MTKYYLKFDTMKHIIQAPANCSVEDVLHIICRAEEIAWIQLRRNEKKFLNDINNEKDCRL
RFHVLDDKGKRKKRIQTREEKIFILVNDCLTGDPLVHDLSMSQDMNSVCSNGCRIAKCMK
EYFLYKKSYSGALNSALLVKCLHQKLWDHSQYLLKQLPGIGMVTAKALLSMGIKSFEALS
EADPRKIELITGRKYPYGNHIKESLQSLPPKVEMIFKETDGQKQGKSKLLITLTRLSHPH
NSTKRHYADMMVGIEEDNLILFHEKIRLEDFSSPYNAVALYKKPRQGKLIIKAALIVEEF
IGIDLHQKVIITPEINLNVHNYRPKKLFTXDLTILKDDNDCTSHAQEIEQSNSNELTKKS
NSMPSFKLLDEELEDNVVIENGDADCKIINERTVFDHIRKKAKKLPPLPVPNDACSPSLE
TFAFIRKRTREQHMELDNDVEFVDMQGDKFPSGTVLIQSPELTEPKQNRPIFNSSNGFDL
IDKGKALTELWSEGGKVATKYLDIEPRSLNQETVFDHIRKKSRNFPALASTRITRAEVID
LDCDMNQNTVLNKGTFSIAQTNLGEEVQELKQALHRKTSNSSTKAGFSSINSPNGLELKT
SQVPSVLLEKNNGESTVKQLQSLTSVNIQNCSPESTGEVGKESFLGFESVFSFLF
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtatacactaaaggcggtgaatgatttacctgtcctttttcgctcagccttt
aacttcaggtatttcaactcattgcagagtgaatgtttctccacgtgcttccagtctgat
gtaaacatggttatttctgcgccaaccggaagtggaaaaactgtactttttgagttgtgc
attatgaggcttctctcaaaattcatcggcactgatggaaatttcatccatcttaaaggg
acacttaaaacaatctacatcgcaccttcaaaggctttggtacaagagaagcttcgggat
tggactcagaagcttggaccactgggaataaaatgtctcgagatgacaggtgatagtgag
ttctacagcatcagcaacatacaggaggcagacatcattctgactacacccgagaaattt
gatgctgctactcgttatcgcataaaagatggaggtttgagttttttcagtgatatagca
ctagtgctcattgatgaagttcatttgctgaatgatcctcgaggagcagcactagaagca
attgtcagtagaattaaattgcttgcttgtaatcctgagatgagatcaagttctttatcc
catgtccgattccttgctgtttctgctacaatcccaaatatcaatgatctcgcggagtgg
cttgtgactccatctcaaggaattaaaaggtttggagaagaaatgagaccagtaaaattg
accacaaaagttttggggtacgcacgggcaaaaaatgatttcttatttgagaagagcctc
cagaactacatttttgatcttctcaagcaatactctggtggaaaatctgctttgattttc
tgctcaactaggaaaggagcacaagaggcagcacaacgactctctcagatagcaatgact
tttggtaattcaagtcctttcatcaaaggccgagaagaacaggaaagattaagggaggct
tcattatcatgtggcgacaaacaaatgcaatcttacatgctttacggtgttggttatcat
aacggtggactggctttgaaagatcgcaatcttatcgaaggtctttttctgaatggtgat
ctacaaattttatgcacgacaaacactctggctcatggaattaatctgccagcacatacg
gtcatcatcaaatcaacacaatacttcaataaggagaaaggtacatacatggaatatgac
cggtccatggtattgcagatgtgtggaagagctggccgtcctccatttgatgacacagga
atggtcataattatgaccagaaaggaaaccgtccatttgtacgagaatctattaaatgga
tgcgagatggtggaatcacaattgcttccgtgcgtaacagagcatctaaccgcagagata
gttcaggcaactgtctcggatataacaatggcgattgaatggatgaaatgctcatacttg
tacgtgagaatgaaaaagaatccggagaattactcgatattaaaagggctgtctggtgac
cgaatagagaaacatttgcaagagatttgcgttcagaaggttaacgaattatcccaatat
caaatggtctggaccgacgaagacggtttccttctaaaaccacttgagcccggaaggttg
atgactaaatattatctgaagtttgacacaatgaaacatattattcaagcacctgcaaac
tgcagcgtggaggatgttcttcacattatatgtcgagcggaagaaattgcatggatacaa
ttgaggcggaatgagaagaagtttcttaatgacataaacaatgaaaaagattgtcgtctt
cgttttcatgtccttgacgataagggaaaaagaaaaaaacgtatacaaaccagagaggag
aagatatttattctggtgaatgactgcctgactggagatcctttagtgcatgacttatcc
atgagccaggacatgaactctgtgtgctcaaatgggtgccgaattgcaaagtgcatgaaa
gagtattttttgtacaagaaaagctatagtggagctttaaattcagcactgctagtcaaa
tgtttacatcagaagttatgggaccacagtcaatacttgttgaaacaattaccaggaatt
ggaatggtgactgcgaaggcactgctttcaatgggaatcaagtcattcgaggccctttct
gaggctgatccaaggaagatagagttaattaccggtcgaaaatatccatatgggaaccat
attaaggagtctttgcaatcactacccccaaaagttgagatgatattcaaagaaactgat
ggccaaaagcaagggaagtccaagctactgataacattaacgaggttatcacatccccac
aattcaacaaaacgacactatgctgatatgatggtcggtatagaagaagacaacctcatc
ctgttccatgaaaagataagactggaggatttctcaagcccatacaatgctgttgcatta
tacaagaagcctcggcaaggaaaactgatcattaaggcagctctgatagttgaagaattc
ataggtatcgatctccatcaaaaagtcataatcactcctgagataaacttgaatgtccat
aattatcgtccaaaaaaattattcacanacgacttgactatcctaaaagacgacaatgac
tgcacatctcatgctcaggagatcgaacagtccaattcaaatgaattgacaaagaaatca
aattccatgcccagcttcaaacttctggacgaagagttagaagacaacgttgttattgaa
aatggagatgccgactgcaaaattatcaacgaaagaacagtgttcgatcacattcgcaaa
aaggccaaaaaattaccacctttacctgtgccaaatgatgcttgttctccatctttagag
accttcgctttcatcagaaaacgcactcgtgagcaacatatggaacttgacaacgacgtt
gagtttgttgacatgcaaggcgataagtttccaagtggcacggtcttgatccaatctccc
gaacttacagaacctaaacaaaacagacctattttcaacagctcaaatggctttgatcta
atagacaaaggcaaagcccttactgagctttggagtgaaggaggaaaggttgccactaaa
tatctggatattgaaccaagaagcctaaatcaagaaactgttttcgatcacataaggaaa
aagtcaaggaatttcccagcgttagccagtactagaattactcgtgctgaagtaatcgac
ctggattgcgacatgaaccaaaatactgtgcttaataagggaacttttagtattgcgcaa
accaatcttggagaagaagtccaagaactgaagcaggctttgcatcgcaaaacctcgaat
tcctcgacgaaagctgggttttcttcgataaattctcctaacggcttggagctaaagaca
tctcaagttccctcagtccttctggagaagaataatggtgaatctactgtgaaacagctg
caatctttaacttcagtgaacatacagaattgttcaccggaatcgaccggagaggtcgga
aaagaatcgtttctcgggtttgaaagcgttttctcctttctcttttga
DBGET
integrated database retrieval system
