Primulina tabacum: 142546727
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Entry
142546727 CDS
T11246
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Module
ptab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142546727
Enzymes [BR:
ptab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142546727
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142546727
NCBI-ProteinID:
XP_075510722
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Position
5:12952798..12954510
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AA seq
355 aa
AA seq
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MLVPSGHKFSILPVDFIGINCQPNLVFQVDGNLIAPPRSNWGGRPKDHWICFNGSAKGLA
IRGAGSLEGNGRSWWNTSPANPGVSHEKDLNGDRPHMILVAFGKNVTVSGITLLNSPRMH
MFVYGSEQVEMFNVKVSSPGNSPNTDGIHVSNTQHVRIHHSNISSGDDCVSIQTGCDDIR
VYNVHCNPGHGFSVGGLGEGSSEARVTNVLVRDSTVSGADSLTGVRIKTWQGGSGYVRNV
TFSNIQVSQVGKPIVIDQHYSDRVSGDRPESINSAVAISGVTYENITGTYRSASVLLDCS
ETQPCRDIIIRGVIMLKPIDSGAIVAPNCSHAFGHVLARNPTPPLGRCLFGGKVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcccttcgggccataagttttctatcttacccgttgattttattggaattaat
tgtcaaccaaatcttgtttttcaggttgacggaaaccttattgctcctccaagatcaaat
tggggcgggagaccaaaagatcattggatttgtttcaatggatccgcgaagggattagcg
attagaggtgccggctcacttgagggcaacggccggagctggtggaatacttcccccgcc
aatccaggcgttagtcacgagaaagatttgaatggcgacaggccgcatatgatcctagtt
gcctttggtaaaaacgtgacggtaagtggaataacgttgttaaacagtcctaggatgcac
atgttcgtctatggtagcgaacaagtcgagatgtttaacgttaaggtgtcgtctccagga
aacagtcccaataccgacggaatccatgtttcgaatactcaacacgttcgcatccatcac
tccaatatatctagcggagacgattgtgtctcgatacaaaccggatgcgatgacataaga
gtatacaatgtgcattgcaatccaggacatggattcagcgtcgggggattgggagaagga
agttcagaagccagggtaaccaatgttttggttagggattcaacggtgtcgggcgccgac
tctttgacgggcgtcagaataaaaacctggcagggtggctccggctatgttcgcaacgtt
acattctcgaacattcaagtttcccaagtcgggaaaccgattgtaatcgatcaacactac
agcgaccgggtctccggtgaccgcccggagagcataaattcagcggtggctatttcaggt
gtaacgtatgagaacataacagggacgtacagatctgcatctgttcttcttgactgcagt
gagacccaaccttgcagagatatcataattcgtggcgtaataatgttaaaaccgattgat
tccggagctattgtggcgcctaactgttcgcatgcgttcggtcatgttcttgctaggaat
cctacgcctccgttgggtcgttgcctgttcggtggcaaggtactctaa
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