Primulina tabacum: 142546995
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Entry
142546995 CDS
T11246
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142546995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142546995
03036 Chromosome and associated proteins [BR:
ptab03036
]
142546995
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142546995
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
142546995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
TPR_NUP120_160
Nucleoporin_N
NUP160_helical
Motif
Other DBs
NCBI-GeneID:
142546995
NCBI-ProteinID:
XP_075511130
LinkDB
All DBs
Position
5:15283338..15303121
Genome browser
AA seq
1515 aa
AA seq
DB search
MENTGGWRVAGMEVPLLSTDSIEWVQVSIPSSSNSNPTTSQNPVAKDFASCCPIGDPPSY
FIWKTSKSHSNILELVELSNNSEIPRIGLRLIFPDTLFPFAFICKNEEKFTPGNHFLLYA
LTMSGIAFLIRLRNDFEYGTSSSVPTDEILEYNTQIQPYNGAIKAVAATAGCLVIGRSDG
SVGYFQLGTVDPSAPGFVSELRDDTGFGRLWGILSRGPTLAGVQDLVISEVHQRKLLFVL
HSDGCFRVWDLSTRGKIFSNMMTDQTLPGALVRLWVGEADYNTGIIPLAILHKQHLVDGE
KGDSTDSIFLHGLRCNAGDRLTLFLEPSLKQISLREGEPIDICLTSNKLWILKEDGLVLH
NLFCDDVNEGLSYYYQLQETFIADLLYQSSEHSSADLFSLACAAFSSSKEEVVPIVSSVL
LRGLFFPGVHCNAVLKQTFADHNKHFTDSEFSLFTTNGLKNEILSLIEHQGGYESPVSTF
HCWNRFCSRFVNNWYKNNAACGMFIDPVTGAIGLVRSRTISIFRGLVDAEHIIYGSLDGL
KHFSYSGDEFDLEIQLDFLKCVHDVSQQLGKASSAIFYESLLCRPNISSEDVISPFLKIL
ETGYSSSIAALHISELGADAVSEKELSNQRNLRKFSTEMFMSLHALCYKANSWDKILDVA
ERYLKFLVPQKMVLDVDFKSVFTINCSATVQATSQIAKVMFESAFDVLMLLNYMISISGQ
INMSHSHVSRVKVELVPMIQEIITEWHIIYFFGTTPSESPLVEDFSSRLSSLQIADSNVD
RRLWNGRLGKCEFSLAFILLLSMQNFLGDLKHLYLTRLPNPCNLISLSLEFTSWMIWGRA
GEESSVFFSNSIDLALILLRHGQYNATEYLLSLVDVYSRKEKIFESLQDIDRKMPTLLHL
LGCCLVAQTKIEMHVPIKDRNACEAARCFFRASSVKGAFAALRSLPHEAGWLRVDFSGFT
SDAAWKLQYYQWVMQLFEQFNMNDAANQFALAALELVDEALRPVDSSSQEHSMESLSNVK
GRLWANVFKLTLDLNNYHDAYCAIISNPDEESKSICLRRFIIVLHERGAVKMLCDGQFPL
IGLVEKVEQELARKAERSDFSTKPNPFQLLYAFQMYRHNWRSAASFIYMYSVRLRAEAAT
KDNQYRSLALQERLNALSAAVNALQLAHPAHAWIDSPIEETSHDKNNYPNKKARLIEQEP
SPVDDSLPQKSQSYLDVEKLESEFVLTSAEHLLSLGNINWTSTGYEKPSSELIDLLVETN
LYDMAFTVILKFWKGSALKWELERVFMAMAFKCCPSTPVSLLLGQGQLIDNMSAFPSKDH
RTHGLSLTSSHHKAVQNSNEMFAPGQQSISGGHWLTLELYLDKYISFHPRLPLIVAGALL
SADPQIELPLWLVRLLKGVRTESSFGMTGRESSPASLFCLYVDYGRYVEAINLLIEYVEA
LATVRPADVIHRKKPFAVWFPYTSIERLWCLLEESVRLGHRIDQCEKLKKLLHGVLLNHL
NLLKVDSDDARSSII
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaccggcgggtggcgggtggcggggatggaggtgcctctactcagcaccgac
tccatcgagtgggttcaagtctccatcccatcttcttctaattcgaatcccactacttct
caaaatccagttgccaaagacttcgcctcttgctgccctatcggagatcccccctcttat
tttatatggaaaaccagcaagagccattcaaatattctggagcttgtggagttgtccaat
aacagtgagataccaaggattggacttcgactcattttccctgacactctttttccattt
gcttttatctgcaaaaatgaggaaaagtttactcctggaaatcattttttgctttatgct
ctgacaatgtcaggaattgcattccttattaggttgaggaacgattttgaatatggaact
tcttcctctgtcccaactgatgagatacttgagtataacacacaaattcaaccgtacaat
ggagcaataaaagccgttgcagcaacagcaggttgtcttgtaattggaagaagtgatgga
tctgttggttatttccaacttggcacagttgatccaagtgctccaggctttgtgtctgaa
ctgcgagatgatactggctttggtcggttgtggggcatattatcgaggggtccaacacta
gctggtgtacaggatttagtaatatcagaggtgcaccagagaaaactactttttgtgctt
cattctgatgggtgttttcgagtttgggacctttcaactcgtggtaaaatttttagtaat
atgatgacagaccaaacattgccaggtgctttggtgaggctgtgggtgggggaagctgat
tataacacaggcataattcctttggcaattctgcacaagcagcatttggtagatggagaa
aagggagatagcacggattcaatatttctacatggtcttcggtgtaatgccggagacagg
ttaacattatttctggagccttcattgaaacaaatatcattacgggagggtgaacctata
gatatttgtcttacttcaaacaaattgtggatactcaaggaagatggacttgtactgcac
aacttgttttgtgatgacgtcaatgagggattatcatattactatcaattgcaagaaaca
ttcattgcggaccttctgtatcaaagttctgagcattcttcagcagatcttttttcgctt
gcatgtgcagcattttcatcttccaaggaggaagtcgtcccaattgtctcttctgttttg
ctacgtgggctattttttcctggtgttcattgcaatgctgttctcaagcaaacatttgca
gatcataacaagcacttcactgattctgaattcagtttgttcactaccaatggattaaaa
aacgaaatattgtcacttattgagcatcagggtggttatgaaagtcctgtttcaactttt
cattgttggaataggttttgctcccggtttgtgaataattggtacaaaaataatgccgca
tgcggcatgttcattgatccagtcacaggtgcaattggcttagtcaggagtaggacaata
tctattttccgtggtttggtggatgcagagcatattatctacggttccttagatgggctg
aagcatttcagctattctggcgatgaatttgacttggagattcaacttgattttctcaaa
tgtgtacatgatgtgagccaacagttgggaaaagcttcatcagctatattttatgagtca
cttctatgcagacctaatatatcatctgaggatgttatttctccgtttctaaagatacta
gaaactggatatagttcttcaattgcagctctacatatatcagaactgggagctgatgct
gtatcagagaaagagttgtctaatcagagaaacctgaggaaattttccacagaaatgttt
atgtctctccatgctttatgctacaaagccaactcttgggacaagatcttggatgttgct
gagagatacttaaagtttttggtgcctcaaaaaatggtacttgatgtagatttcaaatca
gtcttcactataaattgttctgctacggtgcaggctacttcccaaattgccaaagtgatg
tttgaatccgcatttgatgttcttatgctgttaaactatatgattagcatcagtgggcag
ataaatatgtctcattcccatgtttcaagagttaaggttgagttagttccaatgattcaa
gaaattattacagagtggcatattatttatttctttgggactacaccatctgaatctccc
ttagttgaagattttagctctcggctttcatccttacaaattgcagatagcaatgtcgat
agaaggctgtggaatgggaggcttgggaaatgtgaattttctctagcatttatcctatta
ctgagtatgcaaaattttttgggagatctgaagcatctttatctaactcggcttccaaat
ccctgtaacttgatcagtttaagtctggaatttacaagctggatgatatggggaagagct
ggagaagaatcttctgtgttcttcagcaattcgattgatcttgcactaatcttacttaga
catgggcagtacaatgccactgagtatttgctcagtttagtggatgtttattcgcgcaag
gagaaaatctttgaaagccttcaggacatcgataggaaaatgcctacgcttcttcatctt
cttggatgttgtcttgttgctcagacaaaaattgaaatgcatgtaccaattaaagacaga
aatgcctgtgaagctgcacgctgctttttcagagcttcatcagttaaaggagcttttgca
gctttgcgaagtttgccacatgaggcaggatggctgcgagttgatttcagtggctttacc
tcagatgcagcatggaagcttcagtattatcaatgggtgatgcagctatttgaacagttc
aatatgaacgacgctgccaaccaatttgctctggccgcacttgagctggttgatgaggct
cttcgccctgtagatagcagctcacaggagcattctatggaatcattgtctaacgtaaag
ggccgactttgggcgaatgtttttaagttgacgttggatcttaataactaccatgatgca
tattgtgcaataatatcaaatccagatgaagaaagcaagagtatttgtttaagacgattc
attatagtgcttcatgagcgtggtgctgtgaagatgctttgtgatggccagtttccattg
atcggtttagtggagaaggtggagcaagagcttgctaggaaggctgagcgttcagatttt
tcaacaaagccaaatccttttcagttactttacgcctttcaaatgtacagacataactgg
cgtagtgctgctagtttcatatacatgtactccgtgcgattgagagctgaagcagcgaca
aaagataatcagtataggtctttggctttgcaagagagattgaatgctctatctgctgct
gttaatgctctgcagcttgctcatcctgcgcatgcttggattgattctcctattgaagaa
acttcacatgacaaaaacaattatccaaataaaaaggctaggctgattgagcaggaacca
tctcctgtcgatgattctctccctcaaaagtcacaatcttatttggatgttgagaaactt
gaaagtgaattcgtcttaacatcagcagaacacctgctctcattaggaaacataaactgg
acctctactggatacgagaaaccgtcttccgagcttattgatctgttggttgaaacaaat
ttatatgatatggcttttacagtgatattgaagttctggaagggttctgctttgaaatgg
gaacttgaaagagtctttatggccatggcattcaaatgctgcccgagcacaccagtctcc
ttacttcttggccaaggacaactgatagataatatgtctgccttccccagtaaagatcat
agaacacatggcctttcgttgacttcatcacaccacaaggctgttcagaattcaaatgag
atgtttgcaccaggacaacaatctataagcggtggccattggctaacacttgaactctat
cttgacaagtacatatcttttcatccgagattaccattaattgttgccggagcacttctt
tcagctgatcctcaaattgagttacctctttggttggttcggcttctaaagggtgttcga
actgaaagtagttttggaatgaccggaagagagtcaagcccggcatcattgttttgcctg
tatgttgattacggccgttacgtggaagcgattaatttgttgattgagtacgttgaagcc
ttggcgacagttcgaccagctgatgttatccatcgtaaaaagccatttgcagtttggttt
ccatatacttcaattgaacgtttgtggtgcttgcttgaggaatcggttagactgggccac
aggattgatcagtgtgaaaagctgaaaaagttattgcatggcgtgttgttgaaccatcta
aatcttctgaaagtggactccgatgatgctcggtcttctataatttag
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integrated database retrieval system
