Primulina tabacum: 142547050
Help
Entry
142547050 CDS
T11246
Name
(RefSeq) putative CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptab Primulina tabacum
Pathway
ptab00061
Fatty acid biosynthesis
ptab00071
Fatty acid degradation
ptab01100
Metabolic pathways
ptab01212
Fatty acid metabolism
ptab04146
Peroxisome
Module
ptab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
142547050
00071 Fatty acid degradation
142547050
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
142547050
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptab01004
]
142547050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142547050
Enzymes [BR:
ptab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
142547050
Lipid biosynthesis proteins [BR:
ptab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
142547050
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of breast milk
142547050
Exosomal proteins of breast cancer cells
142547050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
ATPTG10
Motif
Other DBs
NCBI-GeneID:
142547050
NCBI-ProteinID:
XP_075511232
LinkDB
All DBs
Position
5:complement(15925436..15931697)
Genome browser
AA seq
663 aa
AA seq
DB search
MGGYSVKVAEARAAANGKPSAGAVYRCIYAKDGLMEMPQDLHSPWDFFSKSVERNHGNQM
LGRRPKINGKAGAYSWLTYQEVYDTALKIGSAIRARGVNPGDHCGIYGANCPEWIMSMEA
CISHAITYVPLYDSLGANAVEYIINHAEVSIAFVHETKLPAILACLSNCVSHLKTIVSFG
KISEEQKESAKQLGVDCFSWEEFALLGNLDDYLPPKSRTDICTIMYTSGTTGEPKGVIIN
NGAFMAEVLSMDHLLRETDKAGTEEDVYFSFLPLAHIFDQIIETYCIYRGSSIGFWQADI
RYMIEDLLMLKPTIFCGVPRVFDRIYTGVMEKIAAGGLLKKSLFQLAYNYKLRNMEKGLK
QEEASPLFDKLVFDKIKLAFGGRVRLILSGAAPLPKHIEEFLRVTSCCVLSQGYGLTESC
GGCCTSIANVFSMMGTVGVPMTTIEVRLESVPEMGYDACSVVPRGEICLRGKTLFSGYYK
REDLTKEVFVDGWFHTGDIGEWQPNGEMKIIDRKKNIFKLSQGEYVAVENIESVYSRCPL
VTSIWVYGNSFDSFLVAVVVPERKPLEEWAEKNQEKGDFKSLCGNSKARKYILDELNSTA
KQHKLRGFETLRAIHLEPVPFDIDRDLVTPTFKLKRPQLLKYYKEYIDQIYSGAKGQNGI
APK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggggggttatagtgtgaaagttgcggaagcaagggctgctgcgaatggaaaaccttcg
gcgggggcagtgtataggtgcatttatgcgaaagatgggctgatggaaatgcctcaggat
ctccattctccctgggattttttcagtaagtcggtggaaagaaatcatggcaatcagatg
ctgggacgccgtcctaaaatcaatggaaaggctggtgcatacagttggctgacataccaa
gaagtctacgatacagctctcaagattggttccgccattcgtgctcgtggcgtcaatcca
ggagaccattgtggcatatatggagcgaattgcccagaatggattatgtcgatggaggct
tgcattagccatgccattacctatgttccactatatgattcccttggcgcaaatgcggtt
gagtacattatcaatcatgcagaggtttccatagcttttgttcatgaaaccaagctaccc
gcgatattagcatgtctctccaactgtgtctcacatctaaaaactattgtcagctttgga
aagatttctgaggagcagaaggaatcagctaagcagctcggtgtagattgcttctcctgg
gaagaattcgctcttttgggaaatttggatgattatcttcctccaaaatcaagaactgac
atatgcacgataatgtatacgagtggaacaacaggagaacctaaaggtgtcattataaat
aatggtgctttcatggcagaagtcttgtctatggatcatcttcttagagaaacagataaa
gcgggtacagaagaggatgtatacttctcttttcttcctcttgcccacatattcgatcaa
attattgagacctactgtatctatcgaggttcttcaattgggttttggcaggcggatatc
agatacatgattgaagatcttctcatgttaaagccaactattttttgcggagttcctaga
gtttttgaccggatatacactggcgtaatggaaaaaattgcagctggtggtttattgaaa
aagtcactattccagttggcatacaactataaattgaggaatatggagaagggacttaaa
caagaagaagcatctccgttattcgacaaactggtctttgataagattaaactagcattt
gggggacgtgtccgtcttatcttgtctggagctgcacctttacctaagcacattgaggag
tttcttcgagtgacgagttgctgtgtgttatcgcaaggatatggactcacggaaagttgt
ggcggatgttgcacttccatagctaacgtgttttcaatgatgggaactgtgggtgttcca
atgactaccatcgaagtaaggcttgaatcggtaccagagatgggatatgatgcatgttct
gttgttccaagaggtgaaatttgtctgcggggaaaaacattgttctctgggtactataaa
cgtgaggatctcacaaaagaagtatttgttgacggatggttccatactggtgatattgga
gagtggcagcctaatggggagatgaaaatcattgataggaagaagaatatttttaagctg
tctcaaggggagtatgttgcggtggaaaacattgaaagtgtctactcccgatgccctctt
gtaacatcaatctgggtatatgggaacagttttgactcatttctggtggccgtggttgta
ccggagcgaaagccacttgaagaatgggcagaaaagaaccaagagaaaggcgatttcaag
tctctgtgtggtaattcaaaggcaagaaaatacattttagatgagctcaacagcactgcc
aaacaacacaagctgcgtggtttcgaaacgttgagagcaattcatctggagccggttcct
tttgacattgaccgtgatctcgtgaccccaacttttaagcttaaaaggccacaattgctt
aaatattacaaggaatacatcgaccaaatatacagtggcgcgaaaggacaaaatgggata
gcaccgaagtga
DBGET
integrated database retrieval system
