Primulina tabacum: 142547247
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Entry
142547247 CDS
T11246
Name
(RefSeq) histone deacetylase complex subunit SAP18-like isoform X1
KO
K14324
histone deacetylase complex subunit SAP18
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142547247
03015 mRNA surveillance pathway
142547247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142547247
03036 Chromosome and associated proteins [BR:
ptab03036
]
142547247
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142547247
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
142547247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
142547247
NCBI-ProteinID:
XP_075511537
LinkDB
All DBs
Position
5:complement(19790228..19792922)
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AA seq
151 aa
AA seq
DB search
MAEVQRRPGRLGPPPPTSVKPSAPRFEPVDREKTCPLLLRVFTKVGDHHADGDFAVRGKE
PKDEVQIYTWMDATLRELTDLVKEVAPEARRRDAILSFAFVYPDKCGRFVVREVGRTFSY
PNGRLPDSGSKAFGNLSFQIGDYVDVAILTQ
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtgcaaagaagacctggaaggcttggccctccgccgcctacttccgtcaag
ccttccgcccctcggttcgaacctgtggatcgcgagaagacttgtccgttgttgcttcgt
gttttcactaaggttggagaccatcatgctgatggagattttgctgtgagaggcaaggaa
ccgaaggatgaggttcagatttatacatggatggatgcaactttgcgtgaattaactgat
ctggtgaaagaagtagctccggaagcaagaagaagagatgctattctgtcttttgctttt
gtctatcctgataaatgtggccgttttgtggttagagaggtagggagaaccttttcttac
cctaatgggagactgcccgacagtggaagcaaagccttcggtaatctcagtttccagata
ggtgattacgtggatgtcgcgattctgacccagtaa
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