Primulina tabacum: 142547274
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Entry
142547274 CDS
T11246
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142547274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142547274
03110 Chaperones and folding catalysts [BR:
ptab03110
]
142547274
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142547274
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142547274
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142547274
Messenger RNA biogenesis [BR:
ptab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142547274
Chaperones and folding catalysts [BR:
ptab03110
]
Heat shock proteins
HSP60 / Chaperonin
142547274
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142547274
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142547274
Exosomal proteins of other body fluids (saliva and urine)
142547274
Exosomal proteins of breast cancer cells
142547274
Exosomal proteins of colorectal cancer cells
142547274
Exosomal proteins of bladder cancer cells
142547274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
142547274
NCBI-ProteinID:
XP_075511585
LinkDB
All DBs
Position
5:20851692..20856303
Genome browser
AA seq
578 aa
AA seq
DB search
MYRFAANLASKARVARSSIQQFGSRVGWTRNYAAKDIRFGVEARSLMLKGVEDLADAVQV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNEVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNQK
NQKCEMDEPLILIHEKKISSLNGIVKVLELALKRQRPLLIVAEDVESEALATLVLNKIRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGGQVLTEELGLYLDEVNLDMLGSCKKVSISKDD
TVILDGAGEKKVIEERSEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKM
PAHIIAKNAGVEGAVVIGKLLEQDNPDLGYDAAKGEYVDMVKAGVIDPLKVIRTALVDAA
SVSSLMTTTEAIIVEQPTEEKPSPAMGGGMGGMGGMDY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttcgcagcaaacctagcatccaaggccagggttgcaagaagcagcatccag
cagtttggcagtagagtgggttggaccaggaactatgccgcaaaagacatcagatttgga
gtggaggcgaggtctcttatgcttaaaggtgtggaagatctcgcagatgcagttcaagtc
acgatggggccgaaggggcgtaatgtggtgattgaacagagttggggtgcccctaaagtg
acaaaggatggtgtgacagttgcaaagagcattgaatttaaggacaaagttaagaatatt
ggggcaagccttgtaaaacaggttgcaaatgctacaaatgaagtggctggagatggtact
acttgtgctactgttctcacccgtgcaatatttgccgaagggtgtaaatcagttgcagca
ggtatgaacgccatggatctaaggcggggaatttcaatggcggttgattctgtggtcaca
aacttgaaaagcagggcgagaatgataagcacgtcagaggagattgctcaggttgggaca
atctctgctaacggagaaagagaaataggtgagctgattgcaaaagctatggaaaaagtt
ggtaaagaaggtgtcattacaatacaagatggaaagacattgtttaatgaactcgaagtt
gtggagggaatgaagctggatagaggttatatttctccatacttcattacaaaccagaag
aatcagaaatgtgaaatggacgaacccctcattcttatccatgagaagaaaatatcaagc
ttaaacgggattgtgaaagttctagagctggctttaaagaggcaaaggccactattgata
gttgcagaagatgtggaaagtgaggcacttgcaactcttgtactgaacaagattcgtgct
ggaattaaggtttgtgctattaaagctcctggttttggagagaacaggaaatctggtttg
caagatcttgcagttttaacaggaggccaggtcttaacggaagaactgggactgtacctc
gacgaagtgaatttggatatgctgggctcatgtaaaaaggtctctatatccaaggatgac
actgttatacttgatggggctggtgaaaagaaagtcatagaagaaagatctgagcagatt
aggtcagcaattgaattgagtacctctgactatgacaaggagaagttgcaagagaggcta
gctaaactttctggtggtgtagctgttcttaagattggaggagccagtgaagcagaggtt
agtgagaaaaaagatagggtgacagatgctctaaatgccacaaaggcagctgtggaagaa
ggaattgtgcctggtggtggagttgctctactttatgcatcgaaggaattagataagttg
ccaactgcgaactttgatcagaagattggtgttcaaattattcagaatgcattgaagatg
ccggcacatattattgccaaaaatgccggagtagaaggtgctgttgttatcggtaaatta
ttggaacaagataatcccgatcttggatacgatgcagctaaaggtgaatacgttgacatg
gttaaggccggagtgatcgatccgttaaaagttatcagaacagctcttgtcgatgctgct
agcgtctcttctttgatgaccaccacagaagctatcatcgtcgaacaacctactgaggag
aagccatccccggcaatgggtggcggcatgggtggaatgggtggcatggattactaa
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