Primulina tabacum: 142547298
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Entry
142547298 CDS
T11246
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptab01009
]
142547298
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142547298
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptab04040
]
142547298
Protein phosphatases and associated proteins [BR:
ptab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142547298
Membrane trafficking [BR:
ptab04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
142547298
Ion channels [BR:
ptab04040
]
Chloride channels
Chloride channel (CLC)
142547298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
142547298
NCBI-ProteinID:
XP_075511632
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All DBs
Position
5:21850835..21883884
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AA seq
797 aa
AA seq
DB search
MLSNHLQNGVETAKLMWSRLPVADPEADVGAPNSELGWDGKNEGGGVESLDYEVIENWAY
KQEQEKRGKLYVGYSVVVKWLLALLIGIGTGIAAVFINLSVENFAGWKYSLTFDINQKSY
FAGFLVYTLINLALVLSSVYIITHFAPAAAGSGIPEIKGYLNGIDTHGILLFRTLVGKIF
GSIGSVAGGLALGKEGPLVHIGACIASLLGQGGSTKYHLSSRWLQIFTSERDRRDLVTCG
CAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKTGKCGH
FGSGGFIMWDISDGQEDYSFQEFLPMAVIGVIGGLLGALFNQLTFYIAHWRRNYLHKRGN
RAKVIEVCIVSVLTSIISFGLPLFKKCTPCPEGDAGIECPRPPGMYGNYVNFYCANNNEY
NDLATIFFNTQDDAIRNLFSAKTIHEYSAPSLLTFLVMFYSLAVVTFGTAVPAGQFVPGI
MIGSTYGRLVGMFVVSFYKRLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKL
LPLIMLVLLISKAVGDAFNEGLYEEQARLRGIPLLESKPKYQMRNMTAKEACGNQKVVYF
PRIVKVVDVLSILRSNNHNGFPVIDHSRNGETLVIGLILRSHLLVLLQSKVDFQHSPLPC
ETGPLPIRHNPTEFVKPVSSKGIGINDIQLTTDDLEMYIDLVPFLNPSPYVVPEDTSLTK
VYNLFRQLGLRHILVVPRASRVVGMITRKDLLIEDNEESAAVELQSTSVREDGHEDRILF
RKKTDAEQPLLGLLLDP
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccaatcacttgcagaatggagtggagactgcgaagttgatgtggtcgcggttg
ccggtcgccgaccctgaggctgatgtcggtgccccgaatagtgaattgggttgggacggg
aagaatgaaggcggaggtgtcgaaagtcttgattatgaagtgattgagaattgggcatac
aagcaagagcaggaaaaaagggggaagctttatgtaggatatagcgtggttgtgaagtgg
cttttagcgttgcttattgggattggaactggaatagctgctgttttcatcaacctttct
gttgagaactttgctggatggaagtactcgttgacgttcgatataaatcaaaaatcttac
tttgctggattcttggtttatacgttgatcaacttggctttagtgctatcttctgtatat
atcatcacacattttgcaccagctgccgcaggatcgggtattcctgaaatcaaaggttat
ttaaatggcattgacacccatggtatacttctcttcagaacattagtaggaaagattttc
ggaagcataggttcagtggcaggtggcttagcccttggtaaagaaggtccccttgtacat
attggtgcctgtattgcttcattgcttggacaaggtggatctacaaaatatcatctgagt
tcaagatggctacaaatttttactagtgagcgggatcgtcgtgatcttgtcacctgtgga
tgtgcagcaggcgttgctgcagcatttagagctcctgttggtggtgtattgtttgctctg
gaagaagtaacttcttggtggaggagtcagcttatgtggcgtgtcttttttacgtctgcc
attgtggctgttgttgtacgtacggcaatgggttggtgtaagactgggaaatgtggacat
tttggctctggaggtttcattatgtgggatatctcggatgggcaagaagattattcattt
caggaattcttgccaatggctgttattggtgttatagggggactccttggagcccttttt
aatcagcttactttttacatcgctcactggcgtcgtaattacctgcataagagagggaat
cgtgccaaagttattgaagtttgtatagtttctgtgttaacctcgattatttcatttgga
ttgccactttttaagaagtgcaccccatgtcctgaaggagatgctggtatcgaatgtcct
cgtccacctgggatgtatggaaattatgtcaatttttattgtgctaataacaatgaatac
aatgaccttgcaaccatattcttcaacactcaggatgatgccatcagaaatttgttcagt
gcaaaaacaattcatgaatacagcgccccaagcctgctgacatttttggttatgttttat
agtttagcagtagtcacttttggtactgctgttccagctggtcaatttgttcctggcata
atgattggatcaacttatgggcggttggttggcatgtttgtcgtcagtttctataagaga
ctgaacattgaggaaggaacatatgcgctattaggggctgcatcctttcttggtggttca
atgcgaatgacggtgtcactttgtgtaattatggttgagattacaaacaacctgaagctt
ctacctctaatcatgttggttcttcttatttctaaggctgtcggtgatgctttcaacgaa
ggtctgtatgaagagcaagctcgattaaggggtatccctttactggaatccaaaccaaaa
taccaaatgcgtaatatgaccgcaaaagaggcatgtgggaatcaaaaggttgtctacttc
cctcgcatcgtgaaggttgtggatgtactctctattttaaggagcaacaatcacaacgga
tttcctgtcattgatcactcacgaaatggggaaacacttgttattggcctcatattgcga
agtcatttgctagtactactgcaatcaaaggttgactttcaacatagcccattaccttgt
gaaactggtcctctaccaattaggcacaatcccactgaatttgtgaaacctgtttcaagc
aagggaataggtatcaatgacattcagttaactacagatgatttggagatgtacattgat
cttgttccatttttaaacccttctccttatgtagttcctgaagatacttcattaactaag
gtatacaatttatttcgtcaactgggattaagacacatacttgttgttccacgtgcttct
cgtgttgttggaatgatcacaaggaaggacttgttaatcgaggataatgaagagtcagct
gctgtggagcttcaatcaactagtgtaagggaggatggacacgaagatagaatattgttc
cggaagaaaacagatgctgaacagccactgcttggtcttttattagacccttga
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