KEGG   Primulina tabacum: 142547317
Entry
142547317         CDS       T11246                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ptab  Primulina tabacum
Pathway
ptab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142547317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142547317
   03041 Spliceosome [BR:ptab03041]
    142547317
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     142547317
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     142547317
Spliceosome [BR:ptab03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    142547317
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 142547317
NCBI-ProteinID: XP_075511680
LinkDB
Position
1:51208386..51211244
AA seq 525 aa
MAKKRKSRAIETPQEPEPEPEPEPEPIQYSEPDPEQYSEPDPEQSVTEEIQQTSVEDPSV
GEEEEEEADIEEEAEEEAEGKGEGEGEEGKEVQEDDALLEKIEHEFEITEKPSEKDISEN
GGANEGQNEEDEGELEEEPLEKLLEPFSKDQIVLLVKEAVAKHPDIIDNVRELADADPSH
RKIFVHGLGWDATSETITSVFGKYGDIEDSRVVIDKNSGKAKGYGFILFRHRHGARRALK
QPQKLIGSRMTSCQLASAGPVPAPPPIAGSTVSGAPVNEYTQKKIYVSNVSAEIDVNKLV
EFFSKFGEIEEGPLGLDKQTGKPRGFCLFVYKSAESAKKALEEPHKKFEGQILHCQKAID
GPKHSKGYFNPQHGQPQQQQSQPLVHHQGQQGYYQRTVKRVKYAESSGGMLHTAGHLMAP
SAGPAVPPMTFNHPVPPTAIGQAVAALLATQGAGLGIGNLLGGIGAGVNPQGGQTMMNNV
GYGVPGASGYGGQSVVQGGYGVQPPMGQGGVRPHQGAAPYMGHGH
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggccaagaagagaaaaagccgagctatcgaaactcctcaagagcctgagcctgagccc
gagccggagcccgaacccatccagtatagtgagccagatccggaacagtacagtgagcca
gatccggaacaatcagtcactgaggaaatacaacaaacctcagtggaagacccaagtgtt
ggggaagaagaagaagaagaagcagacattgaagaagaagcagaagaggaggcagaggga
aagggagagggagagggagaagaggggaaagaggtgcaggaagacgacgcccttcttgag
aagatcgaacatgagtttgaaattacagaaaagccttccgagaaagacatttcagaaaat
ggtggtgcaaatgaagggcagaacgaggaagacgaaggtgaattggaggaggagccattg
gagaagcttctcgaacccttttctaaagaccaaatagttcttttggtcaaggaggcagtg
gccaaacaccctgatatcatcgacaacgtgcgcgagttggccgatgccgacccttcacac
cgcaagattttcgtgcacggtcttgggtgggatgcgacttctgaaacgattacctctgtt
ttcgggaagtacggggatattgaggatagtagggttgttatagacaagaattccgggaaa
gctaagggttatggattcattttattcaggcaccgtcatggagcgcgtcgtgccttgaag
caaccacagaagttgatcgggagtcggatgacttcatgccaactggcatcagctggtccc
gttcctgctcctccacccattgctgggtcaactgtttctggagccccagtaaatgagtac
acgcagaagaaaatttacgtgagcaatgtatccgccgagattgatgttaataaacttgtg
gagttcttctcgaaatttggggagatcgaggaaggaccgttggggttggataagcagact
gggaaaccaagaggtttctgcttgtttgtttacaaaagtgccgagagtgccaagaaggcg
ctggaggagccacacaagaagtttgagggtcagattctacattgccagaaggccatagat
ggacctaaacattctaaaggttatttcaatcctcagcatggtcaaccacagcagcaacag
tctcagcctctggtccatcaccaggggcagcaagggtattatcaacgtactgtgaagagg
gttaagtacgcagagagcagtggagggatgttgcatacggctgggcacttgatggcacct
agtgcagggccagctgtgcctcccatgacgttcaatcatccggtacccccgacagctatt
ggacaggctgtagcagcactgttggccactcagggggctggcttaggaatagggaatttg
cttggagggattggtgctggtgtaaatccacaaggaggtcaaacgatgatgaacaatgta
ggttatggagttccaggcgcatctgggtatggaggacagtctgtggtgcagggaggttac
ggtgtccagccaccaatgggtcagggtggcgttagaccacatcaaggtgctgccccctac
atgggtcatggtcactag

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