Primulina tabacum: 142547613
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Entry
142547613 CDS
T11246
Name
(RefSeq) putative methionine--tRNA ligase isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ptab Primulina tabacum
Pathway
ptab00450
Selenocompound metabolism
ptab00970
Aminoacyl-tRNA biosynthesis
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
142547613
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
142547613
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptab01007
]
142547613
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptab03016
]
142547613
Enzymes [BR:
ptab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
142547613
Amino acid related enzymes [BR:
ptab01007
]
Aminoacyl-tRNA synthetase
Class I (U)
142547613
Transfer RNA biogenesis [BR:
ptab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
142547613
Prokaryotic type
Other AARSs
142547613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
142547613
NCBI-ProteinID:
XP_075512096
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All DBs
Position
5:complement(38833002..38846630)
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AA seq
807 aa
AA seq
DB search
MGDHPAAAGSAAAKLPIPGKRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRIRGY
NVLYICGTDEYGTATETKAMEEGCSPKEICDKYHFIHKEVYDWFNINFDEFGRTSSPQQT
EVCQEIFKKLLENNWLSENTMQQLYCETCKRFLADRLVDGNCPTPGCGYDSARGDQCEKC
GKLLNPTELLDPKCKVCRSTPHIRDTDHLFLELPLLKDRLEEYIGNMSMAGGWSQNAIQA
THAWLKEGLRPRCITRDLKWGVPVPLEKFKDKVFYVWFDAPIGYVSITACHTTEWEKWWK
NPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMRTISVTEYLNYESGKFSKTKGIG
VFGNDAKDTNIPVEAWRYYLLTNRPEVSDTLFTWVDLQAKLNSELLNNLGNFVNRVLSFI
AKDPGSGYGSIVPDAPDVCSHPLTMTLGERINNYVDQYIEAMEKVKLKQGLKIAMTISGE
GNAYLQESQFWKLYKEDQASCSVVMKTAAGLVYLLACLLEPFMPSFSLEVLKQLNLPLEG
QVSLSDEKGDIEKVKRPWEILPSGHRIGTPAPLFRELKDEEVEFYKDKFSGSQADRILKA
KAEAKKISEKLKETKISDGKTKKDRPNKSAEVKPKVSSPAETELSISRLNIRVGLIVKAQ
KHADADSLYVEEIDVGEDKPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPAVMRGIKSQAM
VLAASNSDHTMVELVEPPPAAPVGERVIVQGFEGLADDVLNPKKKVWETVQADLKTSTEL
VACYKDLPLTTTAGVCRVSSISEGSIR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcatcccgccgccgccggctcagccgccgcgaagctgccaatacctgggaag
agaaacatactcgttaccagcgccttgccttacgtcaacaacgttcctcaccttggcaac
atcatcggatgtgtgttgagcgctgatgtgtttgcaaggtactgccgaattagagggtat
aatgtgttatatatttgtggtacggatgagtacggaacagcaacggagaccaaggctatg
gaggaagggtgttctcccaaagaaatttgtgacaaatatcattttattcataaagaagtg
tatgactggtttaatataaattttgatgagttcgggcgcacctcaagtccgcagcagact
gaagtttgtcaagaaattttcaagaagctcttggaaaataattggctctctgaaaacaca
atgcagcagctctattgtgagacttgtaaaagattcttggctgatcggcttgtagatggt
aattgtccgactccgggttgtggttatgattctgctcgtggagatcaatgtgaaaagtgt
ggaaagctattaaatccgacggaacttctagatccgaaatgcaaggtctgtcgcagtact
ccacatattcgtgacacagatcacttgttccttgagcttcctttgctgaaggataggtta
gaagaatacattggcaacatgtccatggctggagggtggagccagaatgctatccaagca
acacatgcttggctcaaagaagggttgagaccgcgatgtattactagagatttgaaatgg
ggtgttccggttccacttgagaaatttaaggataaggttttctatgtgtggtttgatgcg
ccaattggatatgtttcaatcacagcatgccatacaactgagtgggagaaatggtggaag
aaccctgaaaatgttgaactgtaccaatttatgggcaaggacaacgtgccatttcatact
gtgatgttcccttctacacttctcggaactggtgaaaactggactttgatgagaaccatt
agtgttacagaatacttgaattatgaatcaggaaaattttccaagaccaaggggattgga
gtttttgggaatgatgcaaaagacaccaacattccggtggaggcgtggaggtattatttg
ttgacaaataggccagaggtatcggatacgttgtttacatgggttgacttgcaagcaaag
ttaaatagtgagctgttgaacaatcttggaaatttcgttaatagagtcttgagtttcatc
gctaaggacccaggttccggatatggttctatcgttcctgacgcacctgatgtgtgttct
catccattgaccatgaccctgggagaaagaattaataattatgtagatcagtatatagaa
gctatggagaaggtgaaattaaaacaagggttgaagattgccatgacaatttctggtgaa
ggaaatgcttatttacaagaaagccaattctggaagctttacaaagaggatcaagcttcg
tgctctgtggttatgaaaaccgcggccggattggtttatcttcttgcatgtcttttagaa
ccttttatgccatcgttttcccttgaggtgcttaaacagctgaatttaccacttgaagga
caagtttcactttctgacgaaaaaggtgatattgaaaaagttaaaagaccctgggagatt
ctaccttcaggtcatagaattggaaccccggcacctttgttcagagaactgaaagacgaa
gaagtagagttctataaagacaaattttctggaagtcaagctgataggattttgaaagca
aaagctgaagccaagaaaatttctgaaaaacttaaggaaacaaagatatcagatggcaaa
acaaagaaggatcggccaaacaaatcagctgaggtgaaacctaaggtttcatctcctgct
gaaacagaactttccataagtagactgaatattcgtgttggtctcattgtaaaggctcaa
aaacatgctgatgctgattctttatatgtcgaagagattgatgttggtgaagataagcct
cgcacagttgttagtggcttggtcaagtacattccccttgaagagatgcagaatcgcaag
gtatgtgttctctgtaacttgaagcctgcagtcatgaggggtataaagtcacaagctatg
gtccttgcggcttctaatagtgatcatacgatggttgagttggttgaacctcccccagcc
gcccctgttggtgaaagagtgatagtccaagggttcgaaggtttggcggacgacgttttg
aaccctaaaaagaaagtttgggaaactgttcaagcggatttgaagacttccacggagttg
gtagcctgttacaaagatttgccgcttacaaccaccgcaggtgtttgtagagtttcatca
attagtgaaggctcgataaggtaa
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