Primulina tabacum: 142547652
Help
Entry
142547652 CDS
T11246
Name
(RefSeq) putative pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142547652
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142547652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
142547652
NCBI-ProteinID:
XP_075512150
LinkDB
All DBs
Position
5:39829362..39834982
Genome browser
AA seq
439 aa
AA seq
DB search
MWSSRRCVCSLLLLGLLAGAMASVPILSSEENGELQSSTASTMAASLDEEALNEHAMDDP
EEVARSVEMATHNSTIRRKLGYFSCVTGNPIDDCWRCDNKWQLNRKRLADCGIGFGRNAI
GGRDGEFYVVTDPGDDNPVNPRPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTI
DGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAIS
IFGSSHIWVDHNSLSNCADGLVDAVMGSTSITISNNYFTHHNEVILLGHSDSYMRDKQMQ
ATIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPVNP
FAKEVTKRVDTPEGRWKGWNWRSEGDLLLNGAFFTPSGAGAGAHASYARASSLGAKSSSM
VGSITYGAGALACRSGRQC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcttccaggagatgcgtgtgttctttacttctgctcgggttactcgccggagct
atggctagtgtcccgatattgagttctgaggaaaacggggagctgcagagctccacagcc
tcaacaatggcggcaagtttggatgaggaagcattgaatgaacatgcaatggatgaccca
gaagaagttgcgagatctgttgaaatggccacacataacagtacaataaggaggaaacta
ggatatttctcatgcgtgacgggcaaccccatcgatgactgctggcgttgcgacaacaag
tggcagttgaaccgcaagcgactcgcggactgtgggatcggttttgggcgaaatgcgata
ggtggtcgtgatggagaattctatgtggtaacagaccctggtgatgataaccccgtaaac
cctagaccaggcactctacgccatgctgttatacaggatgagcctctgtggatcatattc
aagcgcgacatggtcataacattgaagcaagaactcatcatgaatagtttcaagacgatc
gatggtcgtggggtaaacgtgcatattgcaaatggagggtgtattacaatccagtttgtc
acgaatgtcatcatccacggcctccatatccacgactgtaggccgactgggaacgccatg
gtgaggagctccccttcgcattatggatggaggactatggcggatggcgatgcgatttca
atctttggctccagtcacatctgggttgatcacaattcgctctccaactgcgctgacggg
ctcgttgatgctgttatgggatccacttctattaccatttcgaacaactatttcacccac
cataatgaggtgatcttgttgggtcatagtgattcttatatgagagacaagcaaatgcag
gcaacgatcgcgtacaatcatttcggggaaggccttatccagagaatgcctaggtgcaga
catggatacttccatgtggtgaacaatgactacactcattgggaaatgtacgccatcggc
ggaagtgcaaatcctaccatcaacagccaggggaaccgatacctcgccccggtcaaccct
tttgcgaaagaggtaacaaaacgggtcgacacacccgagggtagatggaagggatggaac
tggagatcggagggtgaccttctgctcaatggagctttttttacaccctctggagctggg
gctggagctcatgccagctatgctagggcttcaagcttaggggctaaatcttcctccatg
gttggatctattacatatggtgctggtgccctcgcctgccgttcaggccgccagtgctaa
DBGET
integrated database retrieval system
