KEGG   Primulina tabacum: 142547694
Entry
142547694         CDS       T11246                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ptab  Primulina tabacum
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142547694
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    142547694
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-C3HC4_4 zf-RING_4 Prok-RING_4 RING_XB3-XBAT31 ResIII zf-RING_5 DEAD HBS1_N Baculo_IE-1 zf-ANAPC11
Other DBs
NCBI-GeneID: 142547694
NCBI-ProteinID: XP_075512202
LinkDB
Position
5:40964926..40971450
AA seq 1194 aa
MDTVAMQHEEMQRIIKMVKSVVGPEIPEPAIVKAIYECNNNSDAAINYILDSLSRFSAVH
KTITSTGGARISSVHIPSQNKCGEEVRDSDCDFSNGWGLVKQESTEADATQGEFLSVENG
ESKEILKAKEECDVGFGGGDGYSEGKDLSGDEKCLALVASSRFSFEARLAKLRGNGCLEG
MDGEPEIGSDVNCATLLKEEQNGLNSEEPLNFRGPGAENKVVKEEPYIESESKSLIFVKD
EMKEVISAQPLSARKLSDDEYKKIRACSDYSKTKTERSREMRLSTVLVEDGDFVEEPDWL
MVGRTVINGLSTTKGRKLENNEIVHFAFPSAVKGNRCNSPFVSAKASNAASSIVRFSTKR
SGEIGRLPMEWAKCLVPLVNSSKVKILGRCIAAPVNLVLMQEIMLYVSFYIHHSVFTAAD
LSSWKLEPSHNATTYPLLTLFKLLKVNPFQKAEFTPEELDSRKRSLNLDVEYNENASFIP
GAKRRNGCQQIQQQSKDEQVISESSLNKLVGAVDMYNLEEMEPPETLTCKLRAYQKQALY
WMFELEKGESVEEAARSLHPCWAAYRMCDERAPAIYVNIFSGVASTKYPTASQMARGGIL
ADAMGLGKTVMTIALIHSRNGRGSPEDQQVVLEEVAETEYTKNKKRDSIAESFKKIKGGT
LIICPMALLGQWKDELETHSALDSISIFVYYGGGRTDNPRVIADLDVVLTTYGVLTEAYK
KDSDNSIFHRVEWHRVVLDEAHIIKSSKTLAAQAAFALSSYCRWCLTGTPLQNKLDDLYS
LLCFLHVEPWCNWAWWNKLVQRPYDNGDPRGMKLIKAILRPLMLRRTKESKDKDGRPILV
LPPTDVKVIECEQSEAERDFYEALFKKSKVQFDQFVAQGKVLHNFANILELLLRLRQCCN
HPFLVMSRGDTQEYADLNKLARRFLQTNPDSGTHQAPSRAYVEEVVRDLQNGENAECPIC
LESADDPVLTPCAHRMCRECLISSWRTQVAGLCPICRQTFKKSDLITCPSSSHFRIDVNK
NWKESSKVSKLLDFLEQIFRSGSGEKSIVFSQWTSFLDLLEIPLKERRIGFLRFDGKLVQ
KQRERVLHEFAETREKMVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAVMRIHRI
GQKRTVHVRRFIVKDTVEERLHQVQARKQRMIAGALTDDEXRSARIEELKMLFR
NT seq 3585 nt   +upstreamnt  +downstreamnt
atggataccgtggccatgcagcatgaagaaatgcagagaataatcaagatggtgaaatca
gttgtcgggcctgaaatacccgagcccgccatcgtcaaagctatatatgaatgcaacaac
aactcagatgcagctatcaactacattcttgattcgctttcaagattttcggcggtgcac
aaaaccatcacatcaaccggtggggcaagaatatccagtgttcacataccttcgcaaaat
aaatgtggggaggaggtacgagattctgattgtgatttttctaatgggtggggattagtt
aagcaggaatctactgaagcagatgccacccaaggcgagtttttaagtgtagaaaacggt
gaaagcaaggaaatcttgaaagcgaaagaagaatgtgatgtgggttttgggggaggagat
ggttattcagaggggaaggatttatcgggtgacgaaaagtgtctggcattggtggcaagt
agtcgatttagtttcgaagcgcggttggctaagttgcgtggaaatggctgtttagaaggg
atggatggggaaccggagataggcagcgatgtaaattgtgcaactttgctcaaagaggag
caaaatggtttgaattccgaagaaccgctaaattttcgtggacctggagccgaaaacaag
gtggtgaaagaggagccttatatagagagtgagagtaaaagtctaatctttgtaaaagat
gaaatgaaagaggtaatcagtgcacagccattgagtgcaagaaaattatctgatgatgaa
tataaaaaaatccgagcctgtagcgattattcgaagactaaaacggaaagaagtcgagaa
atgaggctgagtaccgtattggtcgaagatggggattttgttgaggagccagattggttg
atggttgggaggacagtcattaacgggctttccacaacgaaaggaaggaaattggagaat
aatgagattgtacattttgctttccctagtgcagttaaagggaataggtgcaattcaccc
tttgttagtgctaaggcttctaatgcagcttcaagtatagtacgattctcaacaaaaaga
tctggagagattggacggcttccgatggaatgggcaaaatgccttgttcctctagttaat
tcctccaaggtgaaaattcttggtcgatgcattgctgcaccagtaaatcttgtgttgatg
caagagattatgttgtatgtgagtttctatattcaccattcggttttcactgcggctgat
ttatcgtcttggaagcttgagccgtcacacaacgccacaacttatcctcttttgacattg
tttaagcttctgaaagtgaatccttttcaaaaggctgaatttacaccagaagaacttgac
tctcgaaagcgctccctcaacttagatgttgagtataatgaaaatgcctcttttattccc
ggagcgaagagaagaaatggctgccaacaaatccagcagcaaagcaaagatgagcaagtt
atttcagaatcatccttgaataagctggttggtgctgtggacatgtataacttagaggaa
atggagcctccagagactcttacttgtaaattaagggcgtaccagaagcaggcactttac
tggatgtttgagttggagaagggagaaagtgtagaagaagcagcaaggagtcttcatcca
tgttgggcagcatatcgcatgtgtgacgagagagctccagcaatttatgtgaatattttc
tccggggtagcaagtacaaaatatccaactgcaagccagatggcaagaggaggaattctc
gcagatgcaatgggacttgggaagactgtgatgacaattgcattgatacattcaagaaat
ggcaggggtagcccagaggatcaacaagttgttctggaagaagtagcagagactgaatat
actaagaacaagaaaagggactctattgctgagtcttttaagaaaataaaaggcggcact
cttattatttgtccgatggctttactaggccaatggaaggatgaacttgaaacccattca
gcgctagatagtatatcaatctttgtttactacggtgggggaaggacagataacccaagg
gtgattgcagatcttgatgtggtattgactacatatggtgtcttaactgaagcatataaa
aaagactcagataacagcatatttcatagagttgaatggcatagggtagtgttagatgaa
gctcacatcatcaaatcatcaaaaactctggctgctcaggctgcttttgcattgtcctcg
tattgtcgttggtgccttactggcactcctcttcagaataaattggacgatttgtacagc
ctactgtgcttcttgcacgtagagccatggtgcaactgggcatggtggaacaaactggtt
cagaggccatatgataatggtgatccaagaggtatgaaattgatcaaggccattttgagg
ccacttatgctgagaagaacaaaggagtcaaaggataaagacggaaggccgattctcgtt
ctcccaccaaccgatgtcaaagtgattgaatgtgaacaatcagaagctgagcgtgatttt
tatgaagccctcttcaagaaatctaaagttcaatttgatcaatttgtggctcaaggcaaa
gttcttcataacttcgcgaatattctcgagctattacttagactgaggcaatgttgcaac
cacccatttcttgtaatgagccgtggtgatacacaagaatatgcagacttgaacaaacta
gcaagaagattcctccagacaaatccagactcaggcactcatcaagccccttctcgagca
tatgttgaggaagtagtcagggaccttcaaaacggtgaaaatgcagagtgccccatttgc
ctagaatcagcagatgaccctgtgttaacaccatgtgcacatagaatgtgccgggaatgc
cttatatcgagctggcgaacacaggttgctggactctgccccatttgccggcaaacgttc
aagaaaagcgaccttattacatgtccatccagcagccatttcagaattgatgtcaacaag
aactggaaagaatcatccaaagtctccaaacttttggacttcttagagcaaatcttccgt
tcaggttctggagagaaaagcatagtttttagccagtggacttcatttttggatcttttg
gagatcccactcaaggagaggaggattggattcttgaggtttgatggaaagctcgtgcag
aaacagagggagagagtcttgcatgagttcgcggaaactcgggaaaaaatggtgttgcta
atgtcccttaaagcaggtggggtgggcttgaatttgacagcagcttccaatgtttttcta
atggatccatggtggaatcctgcagtagaagagcaagcagttatgaggatccatagaatt
ggtcaaaagaggactgttcacgttagaagattcattgtcaaggatactgtggaagaaaga
cttcatcaagtgcaagcaaggaagcaacggatgatcgccggagctttaacagacgacgaa
ngtcgatcagcccgaattgaggaactcaaaatgctttttagatga

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