Primulina tabacum: 142548443
Help
Entry
142548443 CDS
T11246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptab01009
]
142548443
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142548443
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142548443
Protein phosphatases and associated proteins [BR:
ptab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142548443
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
Pre-60S particles
Helicases
142548443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
HerA_C
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
142548443
NCBI-ProteinID:
XP_075512882
LinkDB
All DBs
Position
6:complement(700494..706089)
Genome browser
AA seq
592 aa
AA seq
DB search
MIGGRKVKVATNGESEVFASCSFSSLGLHPTLCEQLKERLGFEFPTQVQAQTIPVVLSGR
HVLVNAATGTGKTVAYLAPIIHHLQNLDRRIQRSDGTFALVLVPTRELCMQVYDILQKLL
HRFHWIVPGYIMGGENRSKEKARLRKGVSILVATPGRLLDHLKNTSSFLHSNLQWAVFDE
ADRILELGYGKEIEDILNYLGTRQHELIGNENSALAPKVKKQNLLLSATLNEKVNQLAKI
SLENPVMIGLDDKILQNLNHNHAMSQESDTSDRLEVSTRMLHGTSDEEYKLPAQLAQRYI
KVPCGSRLVVLLSVLKNLFEREPSQKVVVFFSTCDAVDFHYSLLSEFQWPPVSQSEAEVR
QMFLRCKTLRLHGNMNHEDRKTTFQIFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPG
EATEYVHRVGRTARLGEKGDSLLFLQPVEVDYLKDLEKHGVMLTEHPLLKLLGSFPLYNL
KHQVKKFVSIDMHPWLLTLERALESYISSETRMKKLAQDAFCAWVRAYTAHRGELKRIFM
VKKLHLGHVAKSFALKDQPSLVNKSIQKQLQKRKRDEKQRVNSRKKRVTAKS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgattggtggtagaaaagttaaagtagctaccaacggcgagtcggaggtgttcgcttcg
tgctctttctccagcctcggccttcaccccaccttatgcgagcagctcaaagagaggctt
ggattcgagtttcccacgcaggttcaggcgcagacgattcctgttgtgctctccggcaga
cacgtgctggttaatgcagcgaccggaactggtaaaactgtggcgtatctcgctccaatt
attcatcacttgcagaatctcgatcgacgaattcagcggtcagatggtacttttgcgttg
gtgcttgtaccaacgcgtgaattatgcatgcaggtgtacgatattttacaaaagttactg
caccgttttcattggattgttccgggctatatcatgggtggggaaaatcgatcaaaggag
aaagctagattaaggaaaggtgtgtcaattcttgttgcaactcctggacgtcttttggat
catttgaagaatacttcatcatttctacactccaaccttcagtgggcagtatttgacgaa
gcagataggattctggaacttggttatggtaaagagatagaagatatacttaattatttg
ggcacaaggcagcatgaattgattggcaatgaaaattcagctctggctccaaaagtcaag
aaacagaatttgctgttatcagctactctaaatgaaaaagtaaatcaactagctaaaatc
agcttagaaaatcctgttatgattggtcttgatgacaagatcttacaaaatttgaatcac
aatcatgctatgtcacaagaatctgatacaagtgacagattagaagtgtccactcgtatg
ttgcatggtacttcagatgaggaatataagcttcctgctcagctggctcagagatacatt
aaagtaccatgcggttctcgactggttgtactcctttctgttctaaagaacctttttgag
agagaaccttcccaaaaggtagttgtgtttttttcaacatgtgatgctgtagattttcat
tattccctgcttagtgaatttcaatggccaccagtttcgcagtcagaagccgaagtcaga
cagatgtttttgagatgcaaaactttgcgtttacatgggaatatgaatcacgaggaccgc
aaaacaacatttcagatattcaaaacggaaaagtcagctcttctcttgtcaacagatgtt
tctgctagaggcttggattttcctaaagtcagatgcattatccagtatgactctccagga
gaggcaactgagtatgtacaccgggttggaaggactgccaggttgggtgagaaaggtgac
tcactgctttttttacaaccagttgaagtagattacctgaaggacctggagaagcacggg
gtgatgctaacggaacatcctcttctcaaactgcttggtagcttccctttatacaatctt
aagcatcaggtcaaaaagtttgtttcaatagacatgcacccgtggctactaaccttggag
agagcattagaatcctatatttcttcagagacaaggatgaagaagttagcccaggatgca
ttctgtgcgtgggtacgtgcttatactgcccatcgtggtgagctaaaaagaatttttatg
gtgaagaaacttcacttaggacatgtggctaaaagctttgcattgaaggatcagccttcc
ttagttaacaaatcaattcaaaagcaactacagaagaggaaaagagacgagaagcagaga
gtaaattcaaggaagaaaagggtcactgcaaaatcttga
DBGET
integrated database retrieval system
