Primulina tabacum: 142548453
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Entry
142548453 CDS
T11246
Name
(RefSeq) zinc finger CCCH domain-containing protein 16 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142548453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142548453
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142548453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
142548453
NCBI-ProteinID:
XP_075512898
LinkDB
All DBs
Position
6:complement(792435..796328)
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AA seq
380 aa
AA seq
DB search
MPPRRELCRNFQRGSCQYGDSCKFLHATPQQSKTNPFGFGVQQQTSNPFSFSVQSNSHTG
GRNDFGSKPNQFKPFENKWIRDSSGNASGATASRQSNGQPQAANHKCDNPESCKQMMMED
FENEMPQWKLTCYGHRRNGPCDIVGDISYEELRGLAYDDAKRGMSFHSIIDREKSLVNSK
LVEFQNLVHKPYMVSSDATPSAQRTFAGTGSNALNDNMCVSRSVSSFSQLKASLNTRSAG
APNYAFGQVSPPRNTSQPFSMFQASNMPLDSSGTFVNQFPRQAVQSSFSFGSAPASNSVM
NANWNPFSTSSKSSQMGNVADSNMKYVSGQSSISVHDNLLKENTDVDHSIWNKTDWKWNA
GEGTHFGAQGNITCMERERG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgagacgagaactgtgtaggaattttcagcgtggaagttgtcaatatggagac
agctgtaagtttcttcatgctaccccacagcaatcaaagaccaacccttttggatttgga
gttcaacagcagacgtcaaatccttttagtttcagtgttcagagcaatagtcatactgga
gggagaaatgattttggatccaaaccaaatcaattcaagccttttgaaaataagtggatc
cgagactcctctggaaacgcaagtggtgccactgcgtcacggcaatccaacggtcagcct
caggcagcaaaccataagtgcgacaatcctgaatcttgcaaacagatgatgatggaagat
tttgaaaatgagatgccacaatggaagcttacttgttatggtcacagaagaaatggacct
tgtgacattgtgggtgacatcagctacgaagagttgcgtggattagcatatgatgatgct
aagcgaggaatgagctttcactctattattgacagagagaagagtttagtgaactccaag
ttagttgaatttcaaaacctagtacataaaccttacatggtatcgtctgatgctacacca
agcgcgcaaagaacttttgctggaactggttcaaatgctcttaatgacaacatgtgtgtt
tctcgttcggtatcaagttttagtcaattgaaggcatcgctgaatacacggtctgctggt
gcgcctaattatgcctttggccaagtaagtcccccgcggaacaccagtcagccatttagc
atgtttcaggctagcaacatgcctttggacagttcaggaacctttgtcaaccaatttcct
cgtcaagctgtgcaaagttccttctccttcggttcggctcccgccagcaacagtgtaatg
aatgctaactggaatccattttcaacttcatcaaaatcatcacagatgggaaatgtggct
gatagcaatatgaaatatgtctccggacagtccagcataagcgtccatgataaccttctc
aaggaaaatactgatgttgatcatagcatatggaataagaccgactggaaatggaatgct
ggagagggcacacattttggtgcacaaggcaacatcacatgcatggagagagagagggga
tga
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