Primulina tabacum: 142548479
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Entry
142548479 CDS
T11246
Name
(RefSeq) prolycopene isomerase, chloroplastic-like isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
ptab Primulina tabacum
Pathway
ptab00906
Carotenoid biosynthesis
ptab01100
Metabolic pathways
ptab01110
Biosynthesis of secondary metabolites
Module
ptab_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
142548479
Enzymes [BR:
ptab01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
142548479
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GDI
GIDA
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
142548479
NCBI-ProteinID:
XP_075512941
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Position
6:1029413..1034569
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AA seq
617 aa
AA seq
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MDILDFGFSNSHRFSTISRSNPLFGFGVQKPRNLCQNAFRFNSLKTQNCCDYQLHKLKFG
GGKAKQMKRFYLFRLKAGVDVDKTVEDVGSLVGDAHSSFYDAIVIGSGIGGLVAATQLAV
KGAKVLVLEKYVIPGGSSGFYQRDGFTFDVGSSVMFGFSDKGNLNLITQALEAVGCKMQV
IPDPTTVHYHLPNSLSIQVHKEYDEFIAELVSKFPREKEGILKFYGDCWKIFNALNSLEL
KSLEEPIYLFGQFFKKPLECLTLAYYLPQNAGNIARKYIKDPELLSFIDAECFIVSTVSA
MQTPMINAAMVLCDRHFGGINYPVGGVGEIAKSLAKGLVNQGSEILYKANVTNIMIENGK
AVGVNLSDGRQFFAKTIISNATRWDTFGKLLKLEDLPEEEARFQRSYIKAPSFLSIHMGV
KADVLPPNTDCHHFVLEDDWKNLEEPYGSVFLSIPTVLDSSLAPEGNHILHIFTTSSIED
WEGVSRKVYETKKELVSKKIISRLEKKLFPGIKSSIVFMEVGTPKTHRRYLARDSGTYGP
MPRGTPKGLLGMPFNTTAVEGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGFEKKNI
VLDVALLRLLGWLRTFA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatatcttggattttgggttttcgaattctcaccggttcagcactataagcaggagt
aatcctttgttcggctttggcgtccaaaaaccaagaaacctatgccagaatgcatttcgt
tttaactcgttgaagacccagaattgctgtgattaccagcttcataagttgaaatttggg
ggtgggaaggctaaacagatgaaaagattctacctttttaggttaaaagcaggcgtagac
gtagataaaacagtggaagatgtgggtagtcttgttggtgatgcacatagttctttttat
gacgctattgttataggttctggaattggtggattggtggcagctactcagctggctgtg
aaaggtgccaaagtcttggttctggagaagtacgtgattcctgggggaagctctgggttt
taccagagggatggattcacttttgatgttggttcatcagtgatgtttggtttcagtgat
aaggggaatcttaacttgattactcaagcactggaagctgttggatgtaagatgcaagtg
atacctgatcctaccactgttcactatcatttacccaacagcctttccatccaagtacac
aaagaatatgacgaatttattgcggaacttgtcagtaaatttccccgcgagaaagaggga
attcttaaattttatggtgactgctggaagattttcaatgcgttaaattcactggaattg
aaatccttggaggagccaatctacctgtttggacaattttttaagaagccacttgagtgc
ttgactctagcttactatctgccccagaatgcgggtaacatagctcgaaagtacatcaag
gatcccgagttgctgtcctttattgacgcagagtgtttcatagtcagcactgttagtgct
atgcagacaccaatgatcaacgcagccatggttttgtgtgacagacattttgggggaatc
aactatcctgttggaggagttggagaaatcgctaagtcattagcaaaaggcttggttaac
caggggagtgagatactatacaaggcaaatgtaacaaatattatgatcgaaaatggaaaa
gcagtgggggtgaatctgtcggatgggaggcaattctttgcaaagaccataatatcgaat
gctactagatgggatacatttggcaagctcttaaaactggaagatttgccggaagaagaa
gcaagatttcaaagatcatatattaaagctccatcgtttttgtctatacatatgggagtt
aaagctgatgttttgccgccaaatactgactgtcaccattttgtccttgaggatgattgg
aaaaatttagaagaaccttatggaagtgtatttttgagcatcccaaccgttcttgattca
tcgttggctccagaaggaaaccacattcttcacattttcacaacttcttccatagaagac
tgggagggcgtatctcggaaagtctacgagacaaagaaggaacttgtgtccaaaaaaata
ataagcaggcttgagaaaaaattgttcccagggatcaagtcatcgattgtttttatggag
gtagggacacctaagacacataggcgatacctggctcgggatagtggcacatatggtcca
atgcctcgtggtactccaaagggattattaggaatgccatttaacacaactgccgtagag
ggtctgtattgtgtgggcgatagttgctttccaggtcaaggcgttatagccgtagctttt
tctggagtaatgtgtgcacatcgagtagcagctgatataggatttgagaagaaaaatatc
gtacttgatgtcgctcttcttcgattacttggttggttaaggacatttgcatga
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