Primulina tabacum: 142548718
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Entry
142548718 CDS
T11246
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142548718
09122 Translation
03013 Nucleocytoplasmic transport
142548718
03015 mRNA surveillance pathway
142548718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142548718
03041 Spliceosome [BR:
ptab03041
]
142548718
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142548718
Spliceosome [BR:
ptab03041
]
Complex C
Other components
EJC/TREX
142548718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
142548718
NCBI-ProteinID:
XP_075513323
LinkDB
All DBs
Position
6:2916589..2920600
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AA seq
153 aa
AA seq
DB search
MSMADGEDIGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIFLT
QAALKECRRIVAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLMDVQTS
KDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggcagacggcgaagatatcggcgagttctacctgcgttactatgtcgggcac
aaggggaaattcgggcacgaattcttggaatttgagttccgacccgatggcaagctccgt
tacgccaacaactcaaactacaagaacgataccatgattcgcaaagagatcttcctcacg
caagccgccctcaaggagtgccgccgaatagttgccgaatccgagataatgaaggaagac
gataataattggccggagcctgaccgtgtgggtaggcaggagctggagattgtgatgggg
aacgagcatatttcgttcacgacgtccaaaattggttccctcatggatgttcaaaccagc
aaagatcccgagggtctgcgcattttctattatcttgttcaggatctgaaatgttttgtc
ttctctttgatctcactccacttcaagatcaaacccatatga
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