KEGG   Primulina tabacum: 142548718
Entry
142548718         CDS       T11246                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
ptab  Primulina tabacum
Pathway
ptab03013  Nucleocytoplasmic transport
ptab03015  mRNA surveillance pathway
ptab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142548718
  09122 Translation
   03013 Nucleocytoplasmic transport
    142548718
   03015 mRNA surveillance pathway
    142548718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142548718
   03041 Spliceosome [BR:ptab03041]
    142548718
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     142548718
Spliceosome [BR:ptab03041]
 Complex C
  Other components
   EJC/TREX
    142548718
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 142548718
NCBI-ProteinID: XP_075513323
LinkDB
Position
6:2916589..2920600
AA seq 153 aa
MSMADGEDIGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEIFLT
QAALKECRRIVAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLMDVQTS
KDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 462 nt   +upstreamnt  +downstreamnt
atgtcaatggcagacggcgaagatatcggcgagttctacctgcgttactatgtcgggcac
aaggggaaattcgggcacgaattcttggaatttgagttccgacccgatggcaagctccgt
tacgccaacaactcaaactacaagaacgataccatgattcgcaaagagatcttcctcacg
caagccgccctcaaggagtgccgccgaatagttgccgaatccgagataatgaaggaagac
gataataattggccggagcctgaccgtgtgggtaggcaggagctggagattgtgatgggg
aacgagcatatttcgttcacgacgtccaaaattggttccctcatggatgttcaaaccagc
aaagatcccgagggtctgcgcattttctattatcttgttcaggatctgaaatgttttgtc
ttctctttgatctcactccacttcaagatcaaacccatatga

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