Primulina tabacum: 142548750
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Entry
142548750 CDS
T11246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142548750
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142548750
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
Pre-60S particles
Helicases
142548750
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
142548750
NCBI-ProteinID:
XP_075513373
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All DBs
Position
6:3175207..3179560
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AA seq
590 aa
AA seq
DB search
MDSNANLNKALTSTRFSDLTPPLSQPVLEALDREAFEFCTPVQVATIPLLCSYKDVAVDA
ATGSGKTLAFVIPVVEILRRASAPKPHQVMGVIISPTRELSSQIFKVAEPFVSTLLNMRP
VLLVGGAEVKADVTKIEEEGANLLIGTPGRLNDIMERMDILDFRSLEILILDEADRLLDM
GFQKQINSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEVKTSNNSLSSQ
QITSAKTPSGLHIEYIECEAEKKSSQLIDILVKNKTRKLIIYFMTCACVDYWGTVLPRLS
VLKDFSLISLHGKMKQVAREKALDLFTSLSSGILLCTDVAARGLDIPGVDCIIQYDPPQD
PNVFVHRVGRTARMGRQGSAIVFLLPKEEAYIEFLRLRRVPLEGTKCSDEAPDIIPQIRA
AAKRDRDIMEKGLRAFVSYVRAYKEHHCSYIFRWKELEIGKLGMGFGLLQLPSIPEVKHY
SLSIEGFVPVEDVKLDEIKFKDKSREKQRKKNLEAKRAAKELEQKQKKLRAVSKPITPVT
RKKTAKQRRAAQSAEDADELANEYRLLKKLKKGKIDENQYAKLTGTEDLL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggattctaacgcgaacctaaacaaggccttaaccagtaccaggttttcggacctcacg
ccgccgctgtcgcaaccggttttagaggcccttgatcgtgaagccttcgagttttgtacc
cctgttcaagtcgcaacaattccattgctctgcagctacaaagatgtggctgtcgacgcc
gcaactggctctggcaaaaccctagccttcgttatacccgttgtcgaaatcctccgccgt
gcttctgctcccaaaccgcaccaggtgatgggagtaattatttctcctactagggagttg
tcctcgcagatatttaaggttgcggagccatttgtctccactttgctaaatatgaggcca
gtgctgttagttgggggagcggaagtgaaagctgatgtgacgaagatagaagaggaagga
gcaaatttgttaattgggacacctggaagattgaatgatattatggagcggatggatata
ttggattttcgtagccttgagatacttattttagatgaagctgataggctgttagatatg
ggattccagaagcagataaattctattatatctcgcttaccaaagctacggagaactggc
ctcttttcggctactcaaactgaggcagttgaagagctatctaaggcaggattgcgaaat
cctgtaagggttgaagttcgagctgaagtaaaaacatcaaacaattcattatcatctcaa
caaatcacttctgcaaaaacaccttcaggactgcatattgagtatattgaatgtgaagcg
gaaaagaaatcttcccagctcattgatatccttgttaagaataaaactcgaaaattgata
atctatttcatgacttgtgcatgtgttgattactggggcactgtacttccacgcctttct
gttcttaaggatttctctttaatctctcttcatggaaagatgaagcaggttgcaagagag
aaagcattagacttatttacatctttgtccagcggcattcttctttgcactgatgtagca
gcacgtggtcttgacattcccggtgtcgactgtattatacagtatgaccctcctcaggac
ccgaatgtgtttgtgcacagggttggtcgaactgctaggatgggccggcaaggaagtgca
attgtcttcttgttgccaaaggaggaagcctatatagagttccttagattaaggagagtt
ccacttgaaggtacaaaatgctctgatgaagctcctgacattattcctcagattcgtgct
gcagctaaaagagatcgtgacatcatggaaaaaggactccgagcttttgtatcttatgtc
cgtgcctataaggaacatcactgttcttatatcttcagatggaaagaacttgaaattggg
aagttgggtatgggatttggcttgttgcagctcccttcgatacctgaagtgaagcattac
tctctttctattgaaggttttgtcccggttgaagatgtaaaactggatgaaatcaaattc
aaggataaatctcgtgagaaacaacgaaagaaaaacttggaagcaaaaagagctgcgaaa
gagctagaacaaaaacagaagaaactgagagctgtctcaaaacctataacccctgttacg
aggaagaaaacagccaagcaacggcgtgctgcccagtcagctgaagacgcagatgagctg
gccaacgagtatcgactgctgaagaagctgaaaaagggcaagatcgacgaaaatcagtac
gcaaaactaactggaacagaggatctgctttaa
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