Primulina tabacum: 142548927
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Entry
142548927 CDS
T11246
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
ptab Primulina tabacum
Pathway
ptab04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
142548927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142548927
04121 Ubiquitin system [BR:
ptab04121
]
142548927
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142548927
Membrane trafficking [BR:
ptab04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
142548927
Atg8 conjugation proteins
142548927
Ubiquitin system [BR:
ptab04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
142548927
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
142548927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
142548927
NCBI-ProteinID:
XP_075513681
LinkDB
All DBs
Position
6:5070901..5076097
Genome browser
AA seq
713 aa
AA seq
DB search
MDDQGKDSILQFAPLQSAVDEGFWHRFSSLKLNKLGIEESPIPITGFVSPCSHRQVSNHV
TLLSESLPPESSEELLTTAISRGNRNRCPVPGLLYNTNTLEGFKALDKQSLLRAEAKKIW
EDIHSGKAKEDMRLLLRFFVISFADLKKWTFHYWFAFPALILDPPATVVDLKPSSQWFSS
EEAESLVSACNDWRNKQSTTDVPFFLLSIAPNSTVTIKHMADFEACQMDDHKILFGFYDP
CNLPNNPGWPLRNFLLFIHVRWGLEKVWFLCYRESRGFADLELSLVGEAIISRSQVSRNH
LSMPNVVGWEHNNKGKKASRCISLAQTMDPNRLAIAAADLNLKLMRWRALPSLNLNVLSA
TRCLLLGAGTLGCQTARMLMAWGVRKITLVDSGKVAMSNPLRQSLYTLNDCLNGGEFKAI
AAAKSLSAIFPAVEAEAVVMSIPMPGHPVHSQEEISALEGCRQLYDLIDSHDAIFLLTDT
RESRWLPSLFCASANKIAITAALGFDSFLVMRHGGGFVSSSHSVTAEASSDSSVEVGKVS
LTDKSRGPRLGCYFCNDVVAPVDSTSNRTLDQQCTVTRPGLAPIASSLAVEILVGILHHP
YGMLAKAEFANSTDAGSANQPLGILPHQIRGSLSQFSQMTLVGHASTSCTACSLTVVSEY
QKRGLDFILEAINHPMYLEDLTGLTELKKSASSFEVDWDDEIDNEVDDDCIEI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaggggaaagattctattcttcaatttgcacccttgcaaagtgctgtggac
gagggtttttggcacagattttcgtcgctgaaactcaacaagcttgggattgaggagtct
cccattcccataactggttttgtctcaccctgctcacatcgtcaagtgtcaaatcatgta
actcttctttctgaatcattacctccggaatctagtgaagagttgcttactacagcaata
agtcgtgggaacagaaataggtgtcctgtacctggccttctttacaatacaaacacattg
gagggattcaaggcactggacaaacaaagcctgcttagggcggaagcaaaaaagatctgg
gaggacatccattcaggaaaggcgaaggaggatatgagattgcttttgagattctttgtt
atttcatttgctgacttgaaaaaatggacctttcactactggtttgctttcccagctctt
attcttgaccctccagctaccgtggttgacttgaagccatcttctcagtggtttagttcg
gaagaggccgaatccctggtatctgcatgcaatgattggcgtaacaagcaatctacaaca
gacgttccattcttcctgttatctattgctccaaattcaactgtgactattaagcatatg
gcagactttgaagcctgccaaatggatgaccacaagattctatttggattttatgaccct
tgtaaccttccaaataaccctggctggcctcttcgaaactttttgctattcattcacgtg
agatggggccttgagaaggtttggtttttatgctaccgtgaaagtcgtggttttgcagat
ttagagttgtccctggtgggtgaagcaataatctcaaggtcacaagtatcaagaaatcat
ctaagtatgccaaatgttgttggatgggagcataacaacaaaggaaaaaaggcttcaagg
tgtatcagccttgcccagacgatggatccaaacagattagccattgcagctgcagatttg
aacttaaagctaatgagatggcgtgcattgccttccttaaatctcaatgttttgtctgca
acaaggtgcctccttcttggtgcaggtacacttggatgccagaccgctcgaatgctaatg
gcatggggtgtcaggaaaattacgctggttgacagtggcaaagtggcgatgtctaaccca
ctgcggcagtctctgtataccttgaatgactgtttgaatggtggtgaatttaaggcaatc
gcagcagctaaaagtctgagtgctatatttccagcagtggaagctgaagctgttgtgatg
tctatcccaatgcccgggcatcctgtacacagtcaagaagagattagtgcgcttgaaggc
tgcagacagttatatgatttaattgattctcatgatgcgatctttttgttaactgatacc
agggaaagtagatggcttccaagtcttttttgtgccagtgccaacaagatcgcaattact
gctgctctagggtttgatagctttctagttatgcgccatggaggtggttttgtgagctct
tctcatagcgtaacagctgaagcatcgagcgattcatctgtcgaagtcggaaaagtctcc
cttactgacaaaagtaggggtccgagattgggttgttacttttgcaatgatgtcgtcgct
ccagttgattcaacctccaatcgtaccttagatcaacaatgcactgttacacgtccaggc
cttgctcctattgcatcatcacttgcagttgaaattcttgttggaattctgcatcatcct
tatgggatgcttgccaaagctgaatttgcaaactcaactgatgctggaagcgctaatcaa
cctcttggtattttaccccatcaaattcgaggctccctctcacagttctctcagatgaca
ctagtgggtcatgcctcaactagttgcacagcttgtagcttgacggtggtatcagaatat
caaaagaggggtttagatttcattcttgaagccataaaccatcctatgtacctagaggat
ctaactggcttgaccgagctgaagaaatctgcttcctcatttgaagttgactgggacgac
gagattgacaacgaagttgacgacgattgtattgaaatctaa
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integrated database retrieval system
