Primulina tabacum: 142548939
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Entry
142548939 CDS
T11246
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptab03000
]
142548939
Transcription factors [BR:
ptab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142548939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
142548939
NCBI-ProteinID:
XP_075513706
LinkDB
All DBs
Position
1:complement(53219620..53222280)
Genome browser
AA seq
505 aa
AA seq
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MSDDGLSAVPTSIRGFIQVPVHMNPSNHSNPSSNQSKRKRNLPGTPDPDAEVIALSPKSL
MATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVKKKVYICPEKTCVHHDPS
RALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRK
DSFITHRAFCDALAEESARFTPVPSVNLNLRNELLLNNNLHNAANSQFATMFRPELAGLE
SGNQLSIDNLQKPRLPIWLDNTSPHLNLNPIQNPSSSDANFLASSSTTLPELVQMAAASQ
NQWLINRSSGALKEEEEDKGNNMCEAISSLYYSTSSQNQQETNHPPAPMSATALLQKAAQ
MGSTRSNNSAIFGTSFGLMSSDFSSLGNFNPLNQPRNEVSQMNLRKPENFNGLMASTSAS
TLTSNNGGDVPGLFESSNPLMGSSRMNSDPLIILTNNKGKQAQSSAVIEAESSLTRDFLG
VGGDELAKFATMGSSMDLRHYSRNN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgggctttctgctgttcctacttccattagagggtttattcaagttcct
gttcatatgaaccctagtaatcattcaaaccctagttcaaatcaatccaagaggaaaaga
aatctacccggaacaccagatccagatgcagaagtgatagcactgtctccaaagtcttta
atggcaacgaacagattcatctgtgaaatctgcaacaagggttttcagagagaccagaat
ctgcagcttcacagaagagggcacaatcttccatggaagcttaagcaaagaacaaacaaa
gaagtgaagaagaaagtttacatttgcccagaaaaaacttgtgtccaccatgacccttca
agggcactcggggatttgacaggaatcaagaagcattacagcagaaaacatggcgagaag
aaatggaagtgcgagaaatgctcaaagaaatatgctgttcagtctgattggaaagctcac
agcaagatctgtggaacaagagagtacaaatgtgactgcggaactctcttctccagaaag
gacagcttcatcacacatagagccttctgcgatgcattagcggaggaaagtgcaagattc
actccagttccttcggtaaatttgaacctgagaaacgaattattgttgaacaataatctt
cacaatgctgcaaattcccaatttgccaccatgttcaggcctgaacttgcaggattagaa
tcaggaaaccagctgagtattgataatttgcagaaaccaagacttcccatatggctagac
aatacaagtcctcatctcaatctgaatcccattcaaaatccaagttcttcggatgcaaat
ttcttggcatcgagttcaaccaccttgcctgaattagtgcaaatggctgccgcctcgcag
aaccagtggttgatcaacagatcatcgggagctttaaaagaagaggaggaagacaaaggt
aataatatgtgtgaagctataagttcactttactacagcactagcagccaaaatcagcaa
gaaacaaatcatccaccagctccaatgtcagccaccgctttactgcaaaaagcagctcaa
atgggatcaaccagaagcaataattcagccattttcggcaccagtttcgggctgatgagc
tcagacttctcgagtctcggaaacttcaatcccttgaaccagccaagaaatgaagttagt
cagatgaatcttaggaaacccgagaattttaatggattaatggcttccacttctgcttca
acactgacctccaacaatggtggagacgtccccggacttttcgagtccagtaatccatta
atgggcagctcaagaatgaactcagatcctctaatcatactcacaaacaacaaaggaaaa
caagcccaatcaagcgcagtaatcgaagcagaaagcagtttaaccagggattttctcgga
gtaggaggggatgaactagcgaaattcgctaccatgggttcttcaatggatttgagacat
tatagccggaataactga
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