Primulina tabacum: 142548955
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Entry
142548955 CDS
T11246
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ptab Primulina tabacum
Pathway
ptab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142548955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142548955
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142548955
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
DUF3630
Motif
Other DBs
NCBI-GeneID:
142548955
NCBI-ProteinID:
XP_075513740
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Position
6:5456374..5460882
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AA seq
592 aa
AA seq
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MDPDSKKSKFSPSPNLGNSKASVPLQSSLFPDEVLEKVVSFIDSHKDRSSVSLVCKDWYN
AERWTRSKLFIGNCYSVSPEIVARRFPRIKSVTLKGKPRFSDFNLLPRDWGADVHSWLVM
FAKVYPFLEELRLKRMAINDESLEILAKSFPGFKALSLYCCDGFTNKGLKAIATHCRNLT
ELDIQDMATDDFSGDWLSCFPEHFSSLEILNFACLNSEIDFDKFERLVSRCSSLRVLKVN
ESISLDQLQRLLVLAPQLKELGTGSFFPELTPRQYREVESAFSNVRNLQTLSGLWDATSS
YLPVLYGACASLSFLNLSDAALQSGPFVKLLAHCPNLRRLWVADTVEDKGLEAVGLSCPL
LEELRVFPSDPYDQHQRDGVTELGFVAVSRGCRKLHYVLYFCRRMTNAAVETIVNNCPDF
THFRLCIMNPGEPDYLTNDPMDEAFGSVVKTCTKLQRLSVSGLLTDLTFEYIGKYAKNLE
TLSVAFAGSSDHGMQCVLEGCPKLRKLEIRDCPFGNAALLSGVEKYEMMRSLWMSACNVT
MKGCKLLAREMPRLNVEVIKDEESDGFQADKVYVYRSVAGPRRDAPPFVHTL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatccggactccaaaaagtccaaattctcaccatcaccaaacttaggcaactcgaaa
gcgtcagttccgttgcaatcatcactattcccagatgaagtcttggaaaaagtcgtgtca
ttcattgattcacacaaggacaggagctcggtctccctggtgtgcaaggactggtataat
gctgaacgttggacgagatcaaagctcttcataggcaactgctattcagtgtctcctgaa
attgtggctaggaggtttccaagaattaagagtgttaccctcaaagggaagccaagattt
tcggatttcaaccttttgcctagagattggggcgctgatgtgcattcttggttggtcatg
tttgccaaagtttacccctttttggaggaattaagactcaagaggatggctataaatgat
gagagcttggagatcttggcgaaatcttttccaggcttcaaagctttgtctctgtactgt
tgtgatgggttcacaaacaaggggctcaaagctatagccacccattgcaggaatttgaca
gaactcgacatacaggacatggcaactgatgacttcagtggagattggcttagttgtttc
cccgaacacttctcctcacttgaaatactaaattttgcatgtctcaacagtgagattgat
tttgataagttcgagagacttgtcagtaggtgcagttcattaagggttctaaaggtcaat
gagagtattagtttggaccaactgcaacgtctgcttgtgcttgctcctcagttaaaagag
ctcggcaccggttcctttttcccagaacttacccctcgccagtaccgagaagttgaaagt
gcatttagtaatgtccgaaatcttcaaactctatcgggcttatgggatgccacgtcatct
tatctcccggttctttatggagcttgtgcaagtctgagtttcttgaacttgagcgatgct
gcccttcagagtggcccatttgtaaagcttctcgctcactgtcccaacttgcgacgtctt
tgggtggccgatacagtagaggacaaggggttagaggccgttggtttaagctgtcccttg
ctcgaagaactccgagttttcccttcagatccttacgaccaacatcaacgtgacggagtg
acagagttaggttttgtagccgtgtctcgtggatgtcgcaaactccattatgtcctctac
ttctgtcggaggatgactaatgctgctgttgagaccatagtaaacaactgccctgatttt
acccacttccgtctttgcataatgaatcctggagagccagattacctgacaaacgaccca
atggatgaggcctttggttctgtggttaaaacttgcactaaactccagcggctttccgtt
tcggggcttctaacagatctaacctttgagtatatcggtaaatatgccaagaatctggag
accctttccgtggcttttgccggaagcagtgatcatgggatgcagtgtgttcttgaaggt
tgccccaagcttagaaagcttgagataagagattgcccgtttggaaatgcggctctgctt
tctggagtcgagaaatatgaaatgatgaggtctttgtggatgtcagcttgtaacgtcact
atgaaagggtgcaagctactggcaagggagatgccaaggttaaatgttgaagtgataaaa
gacgaggaaagtgacggcttccaagctgacaaagtttacgtctaccgttcggtagcaggt
ccgagaagggacgccccgccctttgttcatactctttga
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