Primulina tabacum: 142548987
Help
Entry
142548987 CDS
T11246
Name
(RefSeq) hyperosmolality-gated Ca2+ permeable channel 1.2-like isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptab02000
]
142548987
Transporters [BR:
ptab02000
]
Other transporters
Pores ion channels [TC:
1
]
142548987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
142548987
NCBI-ProteinID:
XP_075513795
LinkDB
All DBs
Position
6:complement(5952326..5959861)
Genome browser
AA seq
765 aa
AA seq
DB search
MATLGDIGVSAGINILSALVFLVAFAILRLQPFNDRVYFPKWYLNGLRSSPVQSGAYVSK
FVNLDWRSYVRFLNWVPNALRMPEPELIDHAGLDSAVYLRIYLLGLKIFVPVALLAWAIL
VPVNWTNNALAISEVMEKLEYSDIDKLSISNIPYGSKRFWTHIVMAYAFTFWTCYALKKE
YATVATMRLHFLASERRRPDQFTVLVRNVPPDLDESVSESVEHFFLVNHPNHYLTHQVVI
NANKLAKLIKKKKSKENWLDYYQLKYSRNQSQRPMKKTGFLGLWGEKVDAIDHQTSEIQR
LSKEIDEERVRVITDSDCIMPAAFVSFKTRWGAAVCAQTQQSRNPTMWLTEWASEPRDIY
WNNLAIPYVSLTVRRLIASVAFFFLTFFFMIPITIVQSLANIEGIEKMAPFLKSVIELHF
IKSLIQGFLPGIILKIFLIVLPSILMIMSKFEGFLSISSLERRSALRHYIFNFVNVFLVS
VIAGTAFQQLNSFLHKSANEIPRTIGVAIPMKATFFITYIMIDGWAGVAGEILRLKPLIF
FHIRNFFLVKTEKDREEAMNPGSIGFNTGEPQIQLYFLLGLVYAVVTPVLLPFILVFFVL
AYVVFRHQIINVYNQQYESAASFWPDVHGRIISALVFSQLILMGLLSTKGAAQSTPFLIA
LPVLTISFQRYCKARYEPAFVSYPLQEAMMKDTLERAREPNLNLKAYLQYAYVHPVFKND
EGDEDYDDVYDVKLDESVLVPTKRQSRKNTPAPSKTSSTSSLDCP
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggctacattaggggacataggggtttcagcaggcataaatatactttctgctttggtt
ttccttgtagcatttgccatccttcggctgcagccatttaatgacagagtatattttcca
aaatggtacctcaatggtttgagaagcagtcccgtgcagtcaggcgcttatgtgagcaaa
tttgttaatttggactggcgatcgtatgttaggtttttgaattgggtaccaaatgctctg
agaatgccagagccagagctcattgatcatgctgggctggattcagccgtctatttacga
atttacttgctgggactaaaaatttttgttcccgtagcattgttagcttgggctatcctt
gtgccagtaaactggacgaacaacgccttggctatatctgaagttatggaaaagctagag
tatagtgatatcgacaagctttctatttcaaacattccatatggatcaaaaaggttttgg
actcatattgtgatggcctatgcctttactttttggacatgctacgctctaaaaaaggag
tatgcgactgttgcaacaatgcgcttgcattttcttgcttctgaaagacgtcgtcctgat
caattcacggttctggttagaaatgtgcctcctgaccttgatgaatcagtgtcggaatct
gtagagcattttttcttggtgaaccatccaaatcattatctgactcatcaggttgtcatt
aatgccaacaaacttgctaaactgatcaagaagaaaaaaagcaaggaaaattggctcgac
tattaccaattaaagtattcaagaaatcaatcacaacgaccaatgaaaaagactggtttc
cttggcctttggggagagaaagtggatgcaattgatcatcagacatctgaaattcagaga
ctgtcaaaagaaatagatgaagagcgggtaagggtgataactgatagtgattgcattatg
ccagcagcatttgtctccttcaaaactcgttggggtgctgctgtttgtgctcaaactcag
caatcaagaaatccgactatgtggttaaccgagtgggcttcggagccacgtgatatctac
tggaataacctggcaataccctatgtttcactgactgttaggaggcttattgcttctgtt
gcttttttcttccttacattctttttcatgatccccattaccattgtgcaatctcttgcg
aatattgagggtatagagaaaatggcaccatttctcaagtcggttattgaactccatttt
atcaagtctttaatccaaggttttttacctggaattattctgaagatttttctcattgtg
ctgccatccatattgatgataatgtccaaatttgagggatttctgtccatttcatccctg
gagagaagatcagcattgagacattatatcttcaacttcgtgaatgttttccttgtgagc
gtaatagcaggaactgcttttcaacaactcaacagttttcttcacaagtccgccaacgaa
attcctagaacaattggtgttgcaattcctatgaaagccactttcttcatcacttatata
atgatagatggatgggctggtgtagcgggagaaatcttgagattgaaacctctgatattc
tttcatataaggaacttttttttggtgaaaactgaaaaggatagagaggaggcaatgaat
ccaggaagcattggctttaatactggtgaacctcagatacagttatattttcttctaggc
cttgtttatgctgttgtgacaccagttctgcttccatttatattggttttctttgtgctg
gcttatgtcgtgttccggcatcagatcataaatgtgtacaaccaacagtacgaaagtgct
gcgtccttttggccggatgtccatggacgcataatatcagctctggtcttctcccagcta
attctaatgggattactgagtacaaaaggagctgctcaatccacgccattcctaattgca
cttcctgtgttgaccatctcatttcaaagatactgcaaggcccgttatgaaccagctttt
gtgtcctaccctttacaggaagcaatgatgaaagatactttagaacgggcacgagaaccg
aacctgaatttaaaagcctatctgcaatatgcttatgtccacccagtttttaaaaatgac
gagggtgatgaagattatgatgatgtatatgatgtgaagttagatgaaagtgttctagtg
cctacaaaacgccagtctcgaaaaaatacaccagcgccgagcaaaacaagcagcacttcc
tcgttggactgtccctga
DBGET
integrated database retrieval system
