Primulina tabacum: 142548997
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Entry
142548997 CDS
T11246
Name
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142548997
09122 Translation
03013 Nucleocytoplasmic transport
142548997
03015 mRNA surveillance pathway
142548997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142548997
03041 Spliceosome [BR:
ptab03041
]
142548997
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
142548997
Spliceosome [BR:
ptab03041
]
Common components
Common spliceosomal components
Cap binding complex
142548997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DYH2-5-8_CC
Motif
Other DBs
NCBI-GeneID:
142548997
NCBI-ProteinID:
XP_075513815
LinkDB
All DBs
Position
6:complement(6049287..6061577)
Genome browser
AA seq
862 aa
AA seq
DB search
MSSWRSLVLRIGENCSEYGGNTDYKDHLETCFGVVRRELLHSSDDILPFLLECAEQLPHK
IPLYATLVGLLNLENEDFVLNIVERIHANLQAALDVGNCNRIRVLMRFLTVLMCSKVLLP
SSLIVLFETLLSSAATTVDDEKGNSSWQACADFYITCILSCLPWGGAELVEQVPEEIDRV
LVGIQAYLSIRRHISDTGCSAFEYNDERNQDDSQKDFLEDLWDRIQDLSTKGWKADSVPR
PHLSFEPQLVSGKSHDFGPLNCPEQPNPPAEVTGITYGIQKHEAELKYPLRMRSLNIFPS
SKTEQDLQPIDRFVVEEYLLDVLLFLNGCRKECASSMVGLPVSFRYEYLMCETIFSQILL
LPQPPFKPIYYTLVIMDLCKALPGAFPSVVAGAVRALFDKIADLDMECRTRLILWFSHHL
SNFQFIWPWEEWSYVLDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSVESAPVLEELLPP
KGTPNFIYSAEDADQTELSLSAELNGMVKDRLTSREIISWIESQVIPDHGPDITLRVVVQ
TLLNIGSKSFTHLITVLERYCQVIARICSDQDKQVLLLSEVSYFWRNNAQMTAIAIDRMM
GYRLVSNLAIVRWVFLPQNVDQFHVSDRPWEVLTNAVNKTSNRITDLRKEISVLKKSVVS
ASEAASKAQSYLEDAKSKPTLTLVDGEPVLAENPVKMKRLQSNVDKTKESEISLRESLEA
KEALFARAVNEIEELFIFLYKNFKNILAEPLRDTEGTLHPSHEADEMAIDEENSPAAEVD
SAYERPQKSHPNGKSTRIGCNVGEKEQWCLSTLGYVKALTRQYSSEIWPHIEKLDAEVLT
DDVHPLVRKAVYSGLRRPADGF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggcggagtcttgttctccgaatcggagagaattgctcggagtatggtgga
aacactgactacaaggaccatttggagacctgttttggcgttgttcgccgtgaattgtta
cattccagtgacgatattttaccctttcttctcgagtgtgctgagcagttgccgcacaag
atacctttgtatgcaacattggttggactcttaaacttggaaaatgaagattttgtcctg
aatattgttgagaggattcatgctaatttgcaggctgctttagacgttggaaattgtaac
aggatacgtgtacttatgcgctttctgactgtactgatgtgcagtaaagttctcctacca
agttcgttaattgttttattcgaaacattattgtcgtcagcagctacaacagttgatgat
gaaaagggaaattcctcttggcaagcctgtgccgatttttatataacatgcattttatct
tgtctcccttggggtggagcagaacttgttgagcaagtccctgaggagatagatagagtt
ttggtgggaatacaagcgtacttgagtatcagaaggcacatttctgacactggttgctct
gcatttgaatataatgatgaaaggaatcaggatgatagccaaaaagacttcttggaggat
ctatgggaccggattcaagatctttccaccaagggatggaaggcggatagcgttcccaga
ccccacctttcatttgaaccacagctggtttctggaaagtctcatgattttggccccttg
aactgccctgagcagcctaatcccccggctgaagtaacagggatcacttatggcatacag
aagcatgaagctgaattgaaatatcctctgcgtatgcgcagcctcaatatttttccttct
agtaagacagagcaggatttgcaacctatagatcggttcgttgtggaagaatatttacta
gacgtgcttttatttttaaatggctgtcgaaaggaatgtgcttcatccatggttggccta
cctgtttccttccgatatgagtaccttatgtgtgagacaatattttcccagattctctta
ttaccccaaccccccttcaagcctatctactataccttggtcatcatggatctatgcaag
gctcttccaggtgcctttccatctgttgtagcgggggctgttcgtgctctttttgataaa
attgctgatttagacatggagtgccgtacacgccttatcctttggttttcacaccattta
tctaattttcaatttatttggccatgggaagaatggtcttatgtacttgaccttccaaaa
tgggcgcctcaaagggtgtttgttcaggaggttttggaaagggaagtgcggctatcatac
tgggacaaaattaaacagagtgttgagagtgctcctgttttagaggagttacttccccca
aaaggtacgccaaatttcatatacagtgcagaagatgcagatcaaactgaactcagtctc
tccgcagagctcaatggcatggtgaaagatcgattaacttctcgtgaaattatctcatgg
attgagagtcaagtaattcctgatcatgggccggatattactctcagagtggttgttcag
actcttctcaatattggttcaaaaagctttactcatttgattactgtcttagagaggtat
tgccaggtcattgcaaggatttgttctgatcaggacaagcaagttttgctcttatctgaa
gtgagttatttctggagaaacaatgcccaaatgacagccatagccattgacagaatgatg
gggtatcgccttgtatctaatctggcaatcgtgagatgggtattcttgccacagaatgtt
gatcaatttcatgtttctgatcgcccctgggaggtcttgacaaatgcggttaacaaaaca
tccaatcgcattactgatctaagaaaagagatatcagtcctaaagaagagtgtggtttcc
gcttctgaagctgcatctaaagcacaatcttacttagaggatgcaaagtcaaagcctact
cttacccttgtggatggtgagccggttcttgcagaaaatcctgtgaaaatgaaacgtttg
caatccaatgttgataaaacaaaggagtccgagatttctttgcgtgaatccttagaagca
aaagaggctctttttgctcgagctgtcaatgaaattgaggaactatttattttcttgtac
aaaaactttaagaacatattggcggaaccacttcgggatacagaaggtaccttgcaccct
tctcacgaggcagatgaaatggctattgacgaggaaaattctcctgcagcggaggtggat
agtgcttatgaaagaccacaaaaaagtcatcccaacggtaaaagcacaagaattggttgt
aatgttggtgagaaggaacaatggtgtctgtcaaccttgggctacgttaaggccctcact
cgtcaatattcttcagagatttggcctcatatcgagaaattagatgccgaggtattgacc
gatgacgttcatccccttgtacggaaagctgtatactctggtctgcgtcgaccagctgat
ggcttttaa
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