Primulina tabacum: 142549317
Help
Entry
142549317 CDS
T11246
Name
(RefSeq) THO complex subunit 4A-like isoform X1
KO
K12881
THO complex subunit 4
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142549317
09122 Translation
03013 Nucleocytoplasmic transport
142549317
03015 mRNA surveillance pathway
142549317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142549317
03041 Spliceosome [BR:
ptab03041
]
142549317
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142549317
TREX complex
142549317
Spliceosome [BR:
ptab03041
]
Complex C
Other components
EJC/TREX
142549317
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
142549317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Btz
Motif
Other DBs
NCBI-GeneID:
142549317
NCBI-ProteinID:
XP_075514311
LinkDB
All DBs
Position
1:complement(53585158..53588157)
Genome browser
AA seq
234 aa
AA seq
DB search
MSSGALDMTLDDLIKTNKKSSGRGRGRAAGPGPARRLPNRSANRAAPYATPKAPESEWGH
DMFAGGGVGGRSTSIETGTKLYVSNLDYGVSNEDVKELFAEVGDLKRYNVHYDRSGRSKG
TAELVFSRRQDALAAIKKYNNVQLDGKPMKIELVGTNISTPAASIPTAGGFGDSNVASRS
GQIRGGFGRSSGGRRGRGFGRGRGHGRGGRGEKVSADDLDADLEKYHADAMQTN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtggtgccctggacatgacccttgacgatctgatcaagactaacaaaaaatct
tccggccggggcagaggccgtgccgctggtcctggacccgcccgtcgcttacccaatcgc
tccgcgaatcgtgctgctccatacgctactccgaaggcaccggaatcagagtggggtcat
gacatgttcgccggcggcggcgttggtggtcgatcgactagtattgagacaggaaccaag
ttatacgtatccaatcttgattatggcgtatctaatgaggatgttaaggaactctttgct
gaagttggtgaccttaaacgttataatgtacactatgataggagtgggcgatcaaagggt
actgctgaattagtcttctcacgacgtcaagatgcattggctgccatcaagaaatataat
aatgttcagctggatgggaaaccaatgaaaatagaactcgttggtacaaacatctctact
cctgctgctagtattcccactgctggtggttttggtgattcaaatgtcgcttctagaagt
ggacaaataaggggtggttttggaaggtcaagtggtggtagacgaggtcgtggatttgga
aggggccgtggacatggaagggggggacgtggtgagaaggtatccgctgacgatctagat
gctgatttggagaagtatcatgcagatgcaatgcagacaaattga
DBGET
integrated database retrieval system
