Primulina tabacum: 142549344
Help
Entry
142549344 CDS
T11246
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Pathway
ptab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142549344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142549344
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142549344
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
U-box type E3
142549344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
MLKL_N
HEAT_2
Neurochondrin
KAP
HEAT_EZ
zf-Nse
Arm_2
MCAfunc
RPW8
Motif
Other DBs
NCBI-GeneID:
142549344
NCBI-ProteinID:
XP_075514377
LinkDB
All DBs
Position
1:53605457..53609481
Genome browser
AA seq
673 aa
AA seq
DB search
MDEDKAALSRKLIEIVDEISAIPEYRAAVKKQYMNLARRLKLLSPMFEEIRDSQESIPED
SMKALASLVKALESAKELLMFGSEGSKIYLVLEREQIMIKFQEVTAQLEQALSGISFEKL
DISDEVKEQVELVLAQFRRAKGRVDAPDFELHHDLLCLYNHSNDAAEDPDVLRRLVEKLQ
FDGISDLTQESIALHELVAETGGDPEESIEKMSMLLKKIKDFVLTVNPNIDSTAPKKSVP
ASSSGKTLTDGDQTNLVIPDDFRCPISLELMRDPVIVSTGQTYERLYIEQWLREGLGTCP
KTQQNLTSNSVTPNYVLRSLIAQWCEANGIEPPKRPSSYRATKTTSACSPDELIKIEALL
HKLTSASLEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVQLLSTPDSRTQEHSVTAL
LNLSICDTNKGCIISSGAVPCIVLVLKKGSMEARENAAATLFSLSVVDENKVTIGSSGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPQGSMVDEAL
AILAILSSHPEGKAAIGAAVAVPVLVDVIGNGSPRNKENAAAVLVHLCSGDQQHLADAQE
LGVMGPLLDLAQNGTERGKRKASLLLERMDRFVETHKQVRVQTETQTRLKTQTQTQNQLS
QPRPPPSVDTVNR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagataaagccgcgttatcgcggaaattgatcgaaattgtcgatgaaatttcg
gcgattccggagtaccgagctgccgtgaagaagcagtacatgaatctagctcggcggttg
aagctgttgtctccgatgtttgaagaaattcgcgatagccaagagtcgatccccgaggat
tccatgaaagcattagcttctctagtgaaagctctggaatcggccaaggaattactcatg
tttggcagcgaagggagcaagatttatctggtattggagagagagcaaatcatgattaaa
tttcaagaagttacggctcagttggagcaagcgctgagtggcatttcattcgaaaaactt
gatatatcagatgaagtaaaggaacaggttgagcttgttcttgctcaattcagaagagca
aagggaagggtggacgcaccagattttgagctgcaccacgatcttttgtgcctttataac
catagtaatgatgctgcagaagatccagatgtattaaggagattggttgaaaaattacag
tttgacggcatatccgacttaactcaagaatcaatagctttgcatgaattagttgctgaa
actggtggggatccagaggaaagcatagagaagatgtcgatgctattgaagaaaattaag
gattttgtgctgacagtaaaccccaacattgactccacggcaccgaaaaagtctgttcct
gcaagtagcagtgggaaaacattgaccgatggagatcagacgaaccttgtcataccagat
gactttcgttgtcctatctcattagagctaatgagggatcctgtcatagtatcaacagga
cagacatatgaaaggttgtacattgaacaatggttgcgggaagggcttggtacttgtccc
aagacacaacaaaatcttactagcaattctgtaacgccaaactatgttcttcgaagtctt
attgcacagtggtgtgaggcaaatgggatcgaacctccaaagcgaccaagcagctatcga
gccactaagactacatctgcatgctcccctgatgagcttatcaagatagaggctcttcta
cataagctaacatccgccagcctcgaagaccaacggtctgcagcaggcgaaatccgcctg
cttgccaaacggaatgcagataatcgggtggcaatagcagaagctggtgcaatccctttg
cttgtccagcttttatcaactcctgattctcgaactcaggagcactccgttactgcactt
cttaacctttcaatatgtgacaccaacaagggttgcataatatcctctggtgctgttcct
tgtatagttctcgtgctcaagaaaggaagcatggaggcacgggaaaatgcagctgccacc
ttgtttagcctgtcagtagttgatgaaaataaggtgacaattggctcttcaggagcaatt
ccaccactggtaacacttttaagtgaaggcactcaaagagggaagaaagatgctgcaacg
gcactcttcaacttatgcatatatcaaggtaataaaggaaaggcggtgagggcaggagtt
attcccacattgatgcggctacttactgaaccccaaggcagcatggtggatgaggcattg
gcaatattggcaatattgtctagccatcctgaaggaaaggcagccattggagctgcagtg
gccgtgcctgttttagttgatgttattggtaatggctcccctagaaacaaagaaaatgca
gcagcagtgttggtacatctatgctctggagaccaacaacaccttgctgacgcgcaggaa
ctaggcgttatgggaccacttcttgatttggcgcaaaatggcacagaaaggggaaagaga
aaagcttccttgctgcttgaacggatggatagatttgtagaaacacataagcaggtgagg
gtgcaaactgagactcagactagactcaaaactcaaactcaaactcagaatcaactatca
caaccacggccaccgccgtcagttgacactgttaatagataa
DBGET
integrated database retrieval system
