Primulina tabacum: 142549417
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Entry
142549417 CDS
T11246
Name
(RefSeq) long chain base biosynthesis protein 2d-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ptab Primulina tabacum
Pathway
ptab00600
Sphingolipid metabolism
ptab01100
Metabolic pathways
ptab04382
Cornified envelope formation
Module
ptab_M00094
Ceramide biosynthesis
ptab_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
142549417
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142549417
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptab01007
]
142549417
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
142549417
Amino acid related enzymes [BR:
ptab01007
]
Aminotransferase (transaminase)
Class II
142549417
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
142549417
NCBI-ProteinID:
XP_075514464
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All DBs
Position
6:complement(38969525..38973892)
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AA seq
489 aa
AA seq
DB search
MITIPYVTALTTYFSYGLLFAFGQFRDFFRKIVDRLSHSSLQGYAPICLGLEDFYIRRLY
LRIQDCFNRPISSPPDAWFDVVERVSKDNNKTLQRTTRVTRCLNLGSYNYLGFAAADEYC
TPRVIESLNFFFPSTCSTRADGGTTKLHIELEDCVANFVGKPAAIVFGMGYVTNSAILPV
LIGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNTPSHLEKVLREQIAEGQPRTHRPWK
KIIVVVEGIYSMEGELCKLPEIVSTCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKELIDYLKYTCPAHLYATSISPPAAQQIISSVKVILG
EDGSSRGARKLANIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLK
RNVAVVTVAFPATPLLLARARICISAAHSKEDLVNALEVISSVGDLVGIKYFPAEPTKPP
LEGDRIKLE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccatcccgtacgtcaccgctttgaccacctattttagctacggcctcctcttc
gctttcggacagttccgcgatttttttaggaagattgtcgatcggttgtctcacagcagc
cttcagggttatgctccaatatgtttggggcttgaggatttctacattcggcggctgtat
ttacggattcaggattgctttaacagaccaatatcaagccctcctgatgcttggtttgat
gtggtggagcgtgtctccaaggacaataacaaaactctgcagcgaactacaagagttact
aggtgcctcaacttgggttcgtataactatctggggtttgctgcagcagatgaatactgc
acacctcgggtaattgagtccttgaatttttttttcccgagcacctgtagtacccgggct
gatggaggtacaaccaaattgcatattgaattggaggattgtgtagcaaatttcgtagga
aagccagctgccatagtttttggcatgggttatgtgacaaattctgccattcttcctgta
ttaattgggaagggaggtttgatcatcagtgattcattgaaccataactctatagttaac
ggcgctcggggatctggggcaactgttcgagtctttcagcataacactccatctcatttg
gaaaaggttttgagggaacaaattgcagagggacaacccagaacacacagaccttggaaa
aagataattgttgtggtggagggaatctacagcatggaaggggaactgtgcaagctcccc
gaaattgtttccacatgtaagaagtacaaggcatatgtttatctggatgaggctcacagc
attggtgctgttgggaaaactgggaggggtgtctgtgaactattgggagttgatacggcg
gatgtggacattatgatgggaactttcacaaaatcatttgggtcatgtggtggttatata
gcgggatctaaggaacttattgattacttgaaatacacgtgccctgctcatctttatgca
acatcaatatcaccaccagctgcccagcaaattatttcttccgttaaagttattcttgga
gaagatggttctagcagaggggctcggaaactggcaaatatccgtgagaacagcaacttt
ttcaggtcagaattgcagaaaatgggttttgaagttctcggggataatgattcccccgtg
atgcccataatgctttataatccggcaaaaattcctgctttttcacgagagtgcctcaaa
cggaatgtggctgtggtcacagttgcttttcctgcgactcctttattgttggcccgtgca
cgcatttgcatttctgctgctcattcaaaggaagaccttgttaacgctttagaggttatc
agcagtgttggtgaccttgtaggcataaaatactttcctgctgagcccacgaaacctccg
ttggagggtgacagaattaagctggagtga
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