Primulina tabacum: 142549520
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Entry
142549520 CDS
T11246
Name
(RefSeq) putative RNA-binding protein C25G10.01 isoform X1
KO
K12897
transformer-2 protein
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142549520
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptab01009
]
142549520
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142549520
Protein phosphatases and associated proteins [BR:
ptab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142549520
Spliceosome [BR:
ptab03041
]
Common components
Common spliceosomal components
SR proteins
142549520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_DEAH11
PRP38_assoc
RRM_occluded
MAX_effector
Motif
Other DBs
NCBI-GeneID:
142549520
NCBI-ProteinID:
XP_075514615
LinkDB
All DBs
Position
6:complement(40123561..40128029)
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AA seq
231 aa
AA seq
DB search
MADSPRARYAHSPPWEEKKMKSRSRSRSNSRSRSRSRSWSRPRPKSRSRSGSRDRGRTEA
VNKGDTLYVTGLSTRVTERDLEDHFSKEGKVKSVFLVVEPRSRVSRGFAFITMDSVDDAT
RCIKYLDQSVLEGRYITVERSRRKRGRTPTPGHYLGLKSTRGDGGYRGDRGTYRGGSSRD
DYGYQRSSRRSPYRGGRDYSPRRSPYGGGRDYSPRRSPAGRRSKRDRSYSP
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgtgcacgctatgcccactctcctccatgggaagaaaaaaaaatg
aaatcgaggtcaagatcaaggtctaattctcgatctcgatctagatctagatcatggtcg
aggccaaggcccaagtctaggtccaggtctgggtctagagatcgtggcaggactgaagct
gttaacaaaggagacacactctatgttacgggactttctacgagggtcactgagcgagac
cttgaggatcatttctcaaaagaaggaaaggtgaaatcagtatttttggttgtggaaccg
cgttcccgtgtttcccgtggttttgcttttatcacaatggattctgttgatgatgccacc
cgctgtatcaaatacctagatcaatcagttcttgaaggccggtacataactgtggagagg
tcccggaggaaacgtggaaggactcccacccctggtcattaccttggactcaaaagcact
cggggtgatggtggttatcgaggtgaccgtggcacatatcgtggaggttcgagccgtgat
gattatggataccaaaggtcttctaggcgttctccttatagaggtggacgtgattactct
ccgagacgttctccatatggaggtgggcgtgattactctcctcggcgttcacctgctggc
agaagatcaaagagggacaggtcgtattctccatga
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