Primulina tabacum: 142549541
Help
Entry
142549541 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
ptab Primulina tabacum
Pathway
ptab04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
142549541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142549541
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142549541
Membrane trafficking [BR:
ptab04131
]
Autophagy
Autophagosome formation proteins
ULK complex
142549541
Atg1 complex
142549541
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
142549541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
142549541
NCBI-ProteinID:
XP_075514645
LinkDB
All DBs
Position
6:40490277..40494151
Genome browser
AA seq
539 aa
AA seq
DB search
MASSHGNAPSEPAKMEQIITEFFAKSLHVILESRRPYVPSRNYSGEQILSSPSPSSSSSS
SSSFRQRGKWFNLALRDCPAAFENIDFWRQSNLEPVIVDVLIKRRDPLSSSPKWGGLGRN
VSRKEPCSYDLRSYGFGCEKIIERYWVIHYESKKGCGGKGSGVSGSRRSTCTSSHVLYKK
SLLLFRSLYATVRLLPAYKLFHDLISSSRIRLYNPDHRVSSFVEPLXFTRGQEADMQQFV
FSPVDTSRGRICLPVSYCKSFLDVSSEPSTPILPQFIPEYVGSPMAEPRRWFPSFPESQS
SPFTRAFGRRHSWSYGPYSKSHAPFPVSKQEANHSKNPSHEEYRTCTDFPLPRNVASQTR
VSKQDAGASDYHSMSTFDKLPFMKDELRKISDEKPSSNSSPSKLISRSSSRLTFWGGYDD
SEFFGPFVLDNDAKLNVGSRINVLSSCFLSRLNRDQDHFIPQSETYQLKSHRLTLLFICS
RMHRLFTVTALFPDKVPTLKNCTQDSNKTIADALNEFHGYGELKYDLLKKEQQYLLVCS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcatgggaacgctccgtcggagcctgcgaaaatggagcagattattact
gaattttttgctaaaagccttcacgtgatactggaatctcggcgcccttatgttccgtct
cgtaattatagtggcgaacagattttatcgtctccttctccatcatcatcatcttcttcc
tcctcgagttttcggcagaggggtaagtggtttaatttggctcttagggattgccctgct
gcttttgaaaacatagacttttggcggcagagcaatcttgaacctgtgattgttgatgtt
ctgataaagaggcgggaccccttgagttcttcaccaaaatggggtggtcttgggaggaat
gtctctaggaaagagccttgctcttatgatttgagaagttatggatttgggtgtgaaaag
attattgagaggtactgggttatacactatgaaagtaagaagggctgtggtggtaaagga
agtggcgtatctgggagtaggagatccacttgtactagctctcatgttttgtacaagaaa
tctttgttgttgtttagatcgttgtatgcgactgttaggcttttgcctgcttataagttg
tttcatgatcttatttcttcatcccgaattcgattgtataatcctgaccatcgtgtttca
tcttttgttgagccattatgatttacccgtggacaagaggctgatatgcaacagtttgtt
tttagtcctgttgatacttctcgtggtcggatttgtcttccggtgtcgtattgtaagtcg
ttcttggatgtaagttccgaaccttcaacccctatattgccacagttcatacccgaatat
gttggcagtccaatggccgaaccacgtagatggtttccatcttttcctgaatcacaaagc
tccccatttacacgtgcgtttggtaggcgtcatagctggagttatggcccatattcaaag
tctcatgccccattccctgtttctaagcaagaagcaaatcattcgaagaatccaagtcat
gaggagtatcgaacttgtacagattttcctttgcctcgtaatgtagcttctcaaacccgt
gtttctaagcaagatgcgggtgcaagtgattatcactccatgtcaacatttgacaagtta
cctttcatgaaggatgaactcaggaagatatctgatgagaaaccgtcatcaaatagctca
ccgtcaaaattaatctctagaagctctagtaggttaactttttggggcggttatgatgat
tcagagtttttcgggccatttgttctagataatgatgccaaactaaatgttggttccagg
attaatgtcttgtcatcttgttttctgtcaagactgaatcgtgatcaggatcatttcatt
cctcagagcgagacgtaccagctaaagagtcacaggttgacactcttgttcatatgctcc
agaatgcaccgcctcttcaccgtgacagctctttttcccgacaaagttccaaccttgaaa
aattgcactcaggattctaacaagactatagctgatgcactgaacgagttccatgggtat
ggagaattgaaatatgatttgctgaagaaagagcagcagtatcttttagtatgctcgtga
DBGET
integrated database retrieval system
