KEGG   Primulina tabacum: 142549803
Entry
142549803         CDS       T11246                                 
Name
(RefSeq) cullin-3A-like isoform X1
  KO
K03869  cullin 3
Organism
ptab  Primulina tabacum
Pathway
ptab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    142549803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptab04121]
    142549803
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142549803
Ubiquitin system [BR:ptab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     142549803
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     142549803
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 RPC5 PDDEXK_GAPS4 WAC_Acf1_DNA_bd
Other DBs
NCBI-GeneID: 142549803
NCBI-ProteinID: XP_075515083
LinkDB
Position
6:43471643..43476659
AA seq 732 aa
MSGPKKRNFQIEAFKHRAVVDPKYADKSWAILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKHGEKLYSSLSSTMTEHLIKLAESIEAAQGDTFLEELNRKWAEHNKALQMVRDILMYM
DRTYIPSTRKTPVHELGLNLWKENVLHSSKIQTRLQDTLLELVCHDRNGDVINRGLMRNI
TKMLIDLGPSVYQENFEKPFVDVSANFYGVESQQLIENCDCGDYLKKAEKRLNEEIDRVS
HYLDARSESKITNVVEKEMIESHMHRLVHMENSGLVCLIVDEKLEDLGRMYSLLQRVQNG
LTLIKDVMTSHIRETGKDLISDPERLKDPLNFVQELLNRKDRFDKIISLAFNNDKIFQNA
LNSSFEYFININPRSPEFISLFVDDKLRNGLKKDKEDDIETVLDKVMILFRYLQEKDVFE
KYYKQHLAKRLLSGKTASDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHA
AMGAEITDGPTLSVQVLTTGLWPTQSISTCNFPSEILGVCEKFRTYYLGTHSGRRLTWQT
NMGSAVLGATFGNVQKELSVSTYQMCILMLFNNADCLSYKEIEQATEIPPSDLKRCLQSL
ACVKGKIIIRKEPMSKDISEDDAFFFNDRFTSKLYRVKIGTVVAQKESESEKLEMRQRVE
EDRKPQIEAAIVRIMKSRRVLNYNNIVSEVTKQLQPRFLPNPVVIKKRIESLIEREFLER
DKTDRKMYRYLA
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagcggaccgaagaagaggaattttcagatagaggcgttcaagcatcgggcggtggtg
gacccgaaatacgcggataagagttgggctattctggagcacgcgattcacgagatttac
aatcacaatgctagtggtctcagcttcgaggagttgtacaggaatgcatataatatggtc
ttacacaaacatggagagaagctctattccagccttagctctactatgactgaacattta
ataaaattagccgagtctatagaggctgctcaaggtgatacatttctcgaggagctcaat
cggaaatgggccgagcataacaaggcattgcaaatggtcagggacatattaatgtatatg
gacagaacgtacataccaagtacgcgtaagactcctgttcacgagcttgggttgaattta
tggaaagaaaacgttctccactctagcaagatccaaacacggcttcaagacactcttctt
gaacttgtgtgtcatgataggaatggagatgttattaatagaggtctaatgaggaatata
accaaaatgctaattgatttgggcccttcggtataccaagaaaacttcgaaaagccgttc
gttgacgtgtcagccaatttttatggtgtggaatctcaacagcttattgagaactgtgat
tgtggggattatctgaagaaagctgaaaaacgacttaatgaagagatagacagagtatcg
cattacttggatgcaagaagtgaatccaaaataaccaatgtagtagaaaaagagatgatt
gaaagccatatgcatagattggttcacatggagaactctggtttggtctgtctgatagtt
gatgaaaagctcgaggatttggggagaatgtacagtttgttacagagagtgcaaaatgga
ctcacattaatcaaagatgtcatgacttcacatattcgagaaactggaaaggatctaatt
tctgatccagaaaggttgaaggatcctcttaattttgtgcaagagcttttgaatagaaag
gacagatttgacaagatcatcagcttggctttcaataatgacaaaatcttccagaatgct
ctgaattcttccttcgagtatttcataaatattaatccacgctcccctgaattcatttct
ttgtttgtggacgacaagcttcgaaatgggttaaaaaaggacaaagaagatgatatagag
actgtgttggataaagtgatgattctttttcgctacctccaagagaaggatgttttcgag
aagtactacaagcagcatctggcaaagaggcttctttcagggaaaactgcttctgatgat
gcagagagaagcttgattgtaaagctcaaaaccgaatgtggctatcagttcacctcaaag
ctggaaggaatgtttactgatatgaagacttctcaagatacaatgcaggggtttcatgct
gccatgggtgctgagataactgatggaccaacactttcagtccaggtcctcactactgga
ttgtggccaactcaatccatctcgacttgcaattttccttcagaaatcctaggagtttgc
gaaaaattcaggacatactatcttggaactcattcggggcgtaggttaacgtggcaaaca
aacatgggcagtgctgttttgggtgcaacatttggaaatgtccaaaaggagcttagtgtg
tccacttatcaaatgtgcatccttatgctattcaataacgctgattgcctaagttacaaa
gaaatagagcaagctactgagattccgccctcggatttgaagaggtgcttgcagtcatta
gcttgtgtcaaggggaaaattatcattagaaaagaaccaatgagcaaagatattagtgag
gatgatgcctttttctttaatgatagattcacatccaaactgtacagggtgaagataggt
actgttgttgcacaaaaggagtctgaatctgagaagctggagatgcgacaaagagtggaa
gaggacagaaaacctcagatcgaggcagccattgtgaggatcatgaagtccaggcgggtg
ctgaattacaataacatagtatccgaggtaactaaacaactacaaccacgattcctcccc
aacccagttgttataaagaaacgaattgaatcgctgattgagcgtgagtttttggagagg
gacaaaacagataggaagatgtatcgttacctagcttga

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