Primulina tabacum: 142549815
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Entry
142549815 CDS
T11246
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142549815
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
142549815
REST complex
142549815
Heterochromatin formation proteins
Other heterochromatin formation proteins
142549815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
PAH_ZNF598
DUF3013
Motif
Other DBs
NCBI-GeneID:
142549815
NCBI-ProteinID:
XP_075515102
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All DBs
Position
6:43594266..43604163
Genome browser
AA seq
1208 aa
AA seq
DB search
MKRLRDDVCVNPQVKRPCGSSDRGESNGLPHGPVAVGGGGENSVGGTGGSGTGTSAAAAS
TQKLTANDALTYLKIVKDMFLDQREKYDQFLGAMKDFKAERIDTAGVITRVKELFKGYPN
LILGFNAFLPKGYEITLTDEKEAPSKRIVEFEDAISFVNKIKKRFQNDDHVYKSFLAILN
MYRKEHKGIAEVHQEVAALFQDQPDLLDEFTRFLPDTSASASAPHTTMTQSRIDKQLPRQ
NRINGSHGEHDPSFDRPDVDDDKTVLKLHAENKQHSESESRDERSHGQDGRDPGNENNGD
ISMHRLCDESKCTQKGEDSGGNSNLPANDDKDALKSIYCHEFTFCEKVKERLHSAKDYQA
FLKCLHIYSTEIITRKELQGLVADLIGNYPDLMEGFCEFLERCERIDGFLAGVMGKKALW
TEGHSLKALRIEEKSNGQKHELEGRKEKDRDNVKYFRKSIQELDLSNCKSCTPSYRLLPK
DCLLPSASQRSELDTRVLNNRWVSVTSGSEDYSFKHMRRNLYEETLFRCEDDRFELDMLL
ESVSSTAKRVEELLNSINNNSIGPDSRIIVEDHLTVLNLRCIERLYGEHGLDVMDILRKN
AILALPVILTRLKQKQEEWTRCQLDFNKVWAEICSKNHYKSLDHQGFYFKQLDSKTLSAK
SLVSEIKEIKNKKQKENDMSFGISAESKHAIFPNLEFENTETEIHEDIYKIIKYSSKEVC
STKEQFNRVLTFWTTFIEPMLGVTSRPDGSEAVEDDSTSNHRTVTNMLESEESPSANATS
TNLKQSKPYFIGDSNASTQQINHRWKGFADADVVAKDGLTVASNGSLPNTDVLFNTELDP
NYGHGVNSLLENNDAIKESRGSKTRTKDILSPEGVSTLRSNQSINGKFSGGSRFGGQTED
SVDHRKIEKEGELSPNGDFEDNFGSYQNVGSQAKNNFSIDEMQCRTRCHDDISSDATGKN
DADLEDKDDENSFEAADNVFGGESAAVECPQEEHKEEEDGEKHNLDGKPSSQGDETKDQR
VFYGNDTYYVLFRLHQTLYERIFSAKVNSLSSESNSRTTNDMNLDPYASFMDALFSLLGG
SSDNTKFEDDCRSLIGNQSYVLFTLDKLIYKLVKQLQTVLSEEVDCKLLFLYEYEKSRKQ
EKCDDSVYYENVHVLLHKENIYRFECTSFPTRLSIQLVDDGSDKSGVIQVSEDPNFTAYL
HNSVFGEK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattgcgggatgacgtgtgcgtgaacccgcaagttaagcggccatgtggctct
tctgatcgcggagaatcgaatgggctaccacatggaccagttgcagttggaggtggagga
gagaatagtgtcggtggtactggaggtagtggaactggtacaagtgctgctgctgctagt
acacaaaaactcacagctaacgatgcattgacttatttgaagatagtcaaggacatgttt
ctagatcaaagagaaaagtatgatcagtttcttggtgccatgaaagatttcaaggctgaa
agaattgatactgctggtgtcataacaagggtaaaagaattatttaaaggttatcctaat
ctaatactgggatttaacgcattcttacctaagggctatgaaattactctaactgatgag
aaagaagctccatcgaaaaggatagtggaatttgaagatgccatcagttttgtaaataag
attaagaaacgttttcaaaacgacgatcatgtctataaatcattcctagccatcttgaat
atgtataggaaggaacataagggtatagccgaggtccaccaagaggttgcagcacttttt
caagaccaaccagatcttcttgacgagtttactagatttttgccagatacttctgcctca
gcatcagctccacatactacaatgacacaatctcgcattgataagcaacttccacgtcag
aataggattaatggttcccatggagaacacgatccaagttttgatcgtccagatgttgat
gatgataaaacagttttgaagttgcacgctgagaataagcagcattctgaaagtgaaagc
agggacgagagaagccatggtcaagatggtagagatcctggcaatgaaaacaatggagac
attagcatgcatcggctttgtgatgagagtaaatgtacacagaaaggggaagactctggg
ggcaactcaaatttacccgccaatgatgataaggatgctttgaaaagtatatactgtcac
gagtttacgttttgtgaaaaggttaaagaaaggttacacagtgcaaaagattaccaggca
tttttgaaatgccttcacatttacagtactgaaattattacaagaaaggaacttcagggt
ttggttgccgatttaattgggaattatcccgatcttatggagggtttctgcgaatttttg
gagcgctgtgagcgaattgatggatttctggctggtgtgatgggcaaaaaagcattatgg
actgaaggacattctttgaaagccttgagaatagaggagaaaagcaatggacaaaagcat
gaattggaaggaaggaaagagaaggacagggacaatgtaaaatacttcagaaagtccatt
caggagcttgacctatctaactgtaaaagttgcactcctagctatcgacttcttccaaag
gattgtctgttaccttcagctagtcagagatcagagcttgatactcgagttttaaataat
cgatgggtgtctgtgacatctggtagtgaggattactcatttaaacacatgcgaaggaac
ctgtatgaagaaaccctgtttagatgtgaagatgacagatttgagcttgacatgttgctg
gaatcggtcagttcaactgccaagcgagtggaagaactcctgaacagtattaacaataat
tcaattggtccagatagtcgcataattgttgaggaccatctcacagttttgaatctaaga
tgcattgaacggctatatggtgagcatggccttgacgtgatggatattttgcgtaaaaat
gcaattcttgcattgcctgttatcctgacccgtcttaagcagaagcaagaggaatggacc
aggtgtcaattggattttaacaaagtttgggctgaaatttgttctaagaaccattacaag
tctcttgatcatcaaggcttctatttcaagcaactagattccaagaccttgagtgcaaaa
tcgttagtgtctgaaatcaaggaaatcaaaaataagaagcagaaagagaatgatatgtct
tttggtatttctgctgaaagcaaacacgcgatctttccaaatcttgaatttgaaaatact
gagactgaaattcacgaagacatctataagatcattaagtattcttctaaagaagtctgc
tcaacaaaagagcaatttaacagagttttgactttctggacaactttcattgagccgatg
ctgggtgtcacctctcggcccgatggttcagaggctgttgaagatgatagtacctctaat
catcgaacagtgacaaacatgttagaaagtgaagaaagccccagcgccaatgccacttcc
acaaacttgaagcaatcaaaaccttattttattggtgattctaatgcttcaacccaacag
attaatcacagatggaaagggttcgcggatgcggatgttgtggctaaagatggactaact
gtggcctccaatggcagcttaccaaacactgatgtactgtttaatacagaactggaccct
aattatgggcatggggtaaattctttgctagaaaacaatgatgccatcaaagaaagccgt
ggatccaagactaggacaaaagatatactctcccctgagggcgtaagcacattgaggtcg
aatcaatctatcaatggaaagttttcaggaggatccagatttggtggacaaactgaggat
tctgttgatcatcgtaagattgagaaagaaggtgagctgtcgcctaatggcgattttgaa
gacaattttggatcctatcagaatgtcggttcacaagctaagaataattttagcattgat
gagatgcaatgtcgaacaaggtgtcatgatgatatctcttcggatgctactggtaagaat
gatgcagatcttgaggacaaggacgatgaaaattcttttgaggctgctgacaatgtgttc
gggggtgagtctgcagcagttgagtgtccacaggaagagcacaaggaagaggaagatgga
gagaaacacaaccttgatggtaaaccctctagtcaaggtgatgaaacaaaggatcaacga
gttttttatggaaatgacacctattatgtgctttttaggctacatcagacattatatgag
agaatattttcagccaaggttaactctctaagtagtgaatccaattcgagaactactaat
gacatgaatttggacccatatgcgagtttcatggatgctctatttagtttactcggtgga
tcttctgataacacaaaatttgaagatgattgtcgatcgctgattgggaaccagtcttat
gttctctttactttggataagttgatatataagttggtcaaacagctacaaacagtttta
agtgaagaggtggattgtaagctcctttttttgtatgaatatgaaaagtctaggaaacaa
gagaagtgtgatgattcagtttattacgaaaatgttcatgttcttctgcataaggaaaac
atatatcggtttgaatgtacatctttccctacccgtttgtccatacaattggtggatgac
ggaagtgataaatctggagttattcaagtttcagaggatcctaattttactgcctacctt
cacaattcggtttttggagaaaagtag
DBGET
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