Primulina tabacum: 142550805
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Entry
142550805 CDS
T11246
Name
(RefSeq) protein argonaute 1B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142550805
03036 Chromosome and associated proteins [BR:
ptab03036
]
142550805
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
142550805
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
142550805
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
142550805
microRNA pathway
RISC loading complex
142550805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Gly-rich_Ago1
ArgoMid
Clr5
Motif
Other DBs
NCBI-GeneID:
142550805
NCBI-ProteinID:
XP_075515974
LinkDB
All DBs
Position
1:complement(54832014..54840041)
Genome browser
AA seq
1056 aa
AA seq
DB search
MVRKRRTDLPGAGETSEPRESGEGRGAVQRPPAQQQGGYQGGGRGFVQPRGGYGGRGSRM
PPQQQYHGGPPEYQQGRGDQQYQREGSQSQSRGGYIAGRGSGAPSVGEPSSPPAPELHQA
THSPYQAPMISEPIPYGMPTPGGASSSSESPDPTTLELPGQFQSLSVQSEHPTSQEMQPA
SSKAMRFPLRPGKGSYGFKCIVKANHFFAELPDKDLHQYDVSISPEVTSRGFNLAVMEQL
VKLYRESHLGKRLPAYDGRKSLYTAGPLPFTSKEFKITLADEGDGPGSARRERLFTVVIK
FAARADLHHLGMFLQGRQADAPQEALQVLDIVLRELPTSRYSPVGRSFYSPDLGRRQPLG
EGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNMDVYARPLSDSDRV
KIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDENGTLKSVVQYFQETYGFV
IQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQERESDI
LQTVRHNAYAEDPYAKEFGIKISEKPAQVEARVLPAPRLKYHDSGREKDCLPEVGQWNMM
NKRMVNGATVNNWIGINFARGIKDTMAHSFCHELAQMCSVSGMVFNPEPVLPVITSRPDQ
VERVLKTRFHDVMTKLLPHGKELDLLIVILPDNNGSLYGDLKRICETELGIVSQCCLQKH
VYKMSKQYLANVSLKINVKVGGRNTVLLDAISRRIPLVSDRPTIIFGADVTHPHPGEDSS
PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPAKGVMHGGMIRELLISFR
KATGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPTVTFVVVQKRHHTR
LFANNHNDRRAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN
KFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGMA
ASRGGGARSTRVPGGNVAVRPLPQLRENVKRVMFYC
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaagaggcgaactgaccttcctggggcgggtgagacctccgagcctcgggaa
tctggtgaaggacggggtgcagtccaacgaccaccagcacagcagcaaggaggatatcag
ggaggaggaagaggctttgttcaaccgcgaggaggttatggtggtcgaggtagcagaatg
cctccacagcagcagtatcatggtgggcctcccgaatatcagcagggtcggggtgatcag
caatatcaacgagaagggtcacagtctcaaagccgcggtggatatatagcgggtcgtggt
tctggggcaccttccgtgggtgagccatctagtccaccagctcccgagctgcaccaagct
acccattctccatatcaagccccaatgatttctgagcctattccatatggaatgccgacc
cctggaggtgctagctcctcttctgagtcacctgatccgactactttggaactccccggg
caatttcagtctctttctgtccagtctgaacatcctacaagccaagaaatgcagccagct
tcaagcaaggccatgaggttccccctgaggccaggcaagggtagttatggtttcaagtgt
attgtgaaggctaaccacttcttcgctgagcttccagataaagaccttcaccaatatgat
gtgtcaatttcacctgaagtcacttcccgtggttttaatcttgctgtgatggagcagttg
gtgaagctgtatcgggaatctcacctaggaaagagacttcccgcatatgatggaagaaag
agtctttacactgctgggcctcttccttttacttcgaaggagttcaaaatcaccctcgct
gatgaaggcgatggtccaggcagtgccaggcgagaaaggttgtttaccgtggtgatcaag
tttgctgcacgcgccgacttgcatcatttaggcatgtttttacagggaaggcaagccgat
gcacctcaagaagctcttcaggttctggatattgttcttcgggaactgcccacctctcgg
tattctcctgtaggccgatctttctattcccctgatttaggcagaaggcaacctttgggt
gaagggctagaaagctggcgtggtttctaccaaagtattcgtcccactcagatgggactg
tcacttaatatagatatgtcatcaactgcttttattgaaccactaccagtgatagatttt
gtcgcccagcttctgaacatggacgtttatgctagaccattgtctgactctgaccgtgtg
aagataaagaaagcactaagaggagtaaaggtggaagtcactcatcgaggaaatatgcgc
aggaagtaccgcatctctgggttgacatcgcaagcaacacgggaactaacatttccggtt
gatgaaaatggtacgctgaaatccgtggttcaatactttcaagagacttatggatttgtc
attcagcatactcagtggccttgtctacaagttggaaatactcagaggcctaattatttg
ccaatggaggtgtgtaagattgtagaaggccagcgatattctaagaggttgaatgagaga
cagattactgcactgctcaaagtgacatgccaacgtccccaggagagggagtctgacata
cttcagactgtacgtcataatgcatatgctgaagacccttatgctaaggagtttgggatt
aaaataagtgaaaagccggctcaggttgaagctcgtgttttgcctgctccccggctcaaa
tatcatgattcgggtcgggagaaggattgtctgcctgaggttgggcagtggaacatgatg
aataagagaatggtgaatggtgccactgttaacaattggattggtattaactttgcacgc
ggtataaaagacacaatggctcatagtttctgtcacgagcttgctcaaatgtgcagcgtt
tctggaatggttttcaatcctgaaccagtcttgccagttattactagtcgtcctgatcag
gtggaaagagttttaaaaactaggtttcatgatgtcatgacaaaactgcttccccatggg
aaggagcttgacttgctaattgttatattgccagacaataatggttctctttatggtgac
ctgaagcggatatgcgaaacagaacttggtattgtttctcaatgctgtttgcagaaacat
gtctacaagatgagtaaacaataccttgccaatgtgtctctgaagataaatgtcaaggtt
ggcgggagaaacactgtattgcttgacgcaatttctagacgtataccccttgtcagtgat
cgtcctacaatcatatttggcgccgacgttactcatccccatccaggagaggattctagc
ccatcaattgctgctgttgttgcttcccaggattggccagaagtcaccaaatatgctggt
ttggtttgtgcgcaagcacataggcaagagcttattcaggatttgtataaaacctggcag
gatcctgccaaaggggttatgcatggtggcatgatcagggaactactgatatcattccgt
aaagcaactggacagaaaccacagcggatcattttctatagggacggtgtcagcgaaggg
cagttctatcaagtcttgcttcatgaacttgatgcgatccgcaaggcatgtgcatcgttg
gagcctaactatcaaccaacggtcacctttgttgtggtccagaagcgacaccataccagg
ttgtttgccaataaccacaatgacagacgggcagttgataggagtggaaacatactccct
ggcactgttgttgactcaaagatctgccaccccaccgagtttgatttctacctctgcagc
catgccgggatacagggtactagtcgcccggctcattaccacgtgctgtgggatgaaaac
aagtttactgctgatggtcttcagtctctcactaataacctttgttatacatatgcaaga
tgcacacgctctgtttcaattgtgcctcctgcatactatgcacatcttgctgcttttcgg
gctcgtttctacatggagccagaaacatctgacagcggctctatgactagtggtatggcc
gctagtcgtggtggtggtgcaaggagtacaagggttcccgggggcaatgttgcagtgaga
cctctgccacagcttagagagaatgtgaaaagggtcatgttctattgttga
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integrated database retrieval system
